C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002SH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086215-ENSDARG00000063509 CGP 7955 9:9897338-9953624
GeneTranscriptPositionBiotype
ENSDARG00000063509 (lrrc58b)
leucine rich repeat containing 58b 		ENSDART00000092884 (lrrc58b-001) 9940637-9953624 protein_coding
ENSDARG00000086215 (GPR156)
G protein-coupled receptor 156 		ENSDART00000128704 (GPR156-201) 9900910-9918351 protein_coding
ENSDART00000149021 (GPR156-001) 9897338-9926924 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0002SH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175697-ENSG00000163428 CGP 9606 3:120164645-120349339
GeneTranscriptPositionBiotype
ENSG00000163428 (LRRC58)
leucine rich repeat containing 58 		ENST00000295628 (LRRC58-001) 120324509-120349339 protein_coding
ENSG00000175697 (GPR156)
G protein-coupled receptor 156 		ENST00000315843 (GPR156-201) 120165481-120244295 protein_coding
ENST00000461057 (GPR156-001) 120166958-120244116 protein_coding
ENST00000464295 (GPR156-002) 120165481-120285094 protein_coding
ENST00000481907 (GPR156-003) 120242860-120285074 retained_intron
ENST00000495912 (GPR156-004) 120164645-120244120 nonsense_mediated_decay
ENSG00000240882 (RP11-174O3.1)
 ENST00000498792 (RP11-174O3.1-001) 120306726-120307952 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

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Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SH_0001ENSDARG00000063509ENSDART00000092884ENSDARG00000086215ENSDART00000128704ENSDART00000149021CIL_0002SH_0002ENSG00000163428ENST00000295628ENSG00000175697ENST00000315843ENST00000461057ENST00000464295ENST00000481907ENST00000495912ENSG00000240882ENST00000498792
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002SH_0001ENSDARG00000063509ENSDART00000092884ENSDARG00000086215ENSDART00000128704ENSDART00000149021CIL_0002SH_0002ENSG00000163428ENST00000295628ENSG00000175697ENST00000315843ENST00000461057ENST00000464295ENST00000481907ENST00000495912ENSG00000240882ENST00000498792
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000063509 ENSDART00000092884 N/A N/A N/A N/A N/A N/A 2.843±1.13 1.480±0.49 0.786±0.00 N/A N/A N/A N/A N/A
ENSDARG00000086215 ENSDART00000128704 N/A N/A N/A 0.463±0.00 N/A N/A 0.122±0.00 0.230±0.00 0.019±0.00 N/A 0.078±0.00 N/A N/A N/A
ENSDART00000149021 N/A N/A N/A 0.267±0.09 N/A N/A 0.482±0.23 0.227±0.04 N/A N/A 0.345±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163428 ENST00000295628 3.845±0.00 3.989±0.00 1.143±0.00 2.423±1.50 4.908±0.20 3.822±0.05 1.783±0.64 4.214±0.92 4.118±2.52 2.513±0.61 0.894±0.36 4.254±1.70 1.738±0.91 2.957±1.67
ENSG00000175697 ENST00000315843 0.045±0.00 N/A N/A N/A N/A 0.022±0.01 0.003±0.00 0.043±0.00 0.181±0.00 0.036±0.01 N/A N/A N/A 1.364±0.72
ENST00000461057 N/A N/A 0.226±0.00 0.076±0.00 N/A N/A N/A 0.327±0.00 N/A N/A N/A 0.017±0.00 N/A N/A
ENST00000464295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 0.101±0.00 0.251±0.00
ENST00000481907 N/A 0.119±0.00 N/A N/A 0.191±0.00 0.101±0.00 N/A N/A 0.272±0.00 0.105±0.00 N/A 0.022±0.00 N/A 1.429±0.00
ENST00000495912 N/A N/A 0.060±0.00 N/A 0.064±0.00 N/A 0.015±0.00 N/A N/A 0.013±0.00 0.057±0.00 0.139±0.11 0.085±0.07 0.444±0.00
ENSG00000240882 ENST00000498792 0.022±0.00 0.049±0.00 N/A 0.239±0.00 0.139±0.00 0.025±0.00 N/A 0.136±0.00 N/A 0.078±0.00 0.149±0.00 N/A 0.054±0.00 0.085±0.04

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