C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498792 RP11-174O3.1-001 ENSG00000240882 9606 + 3:120306726-120307952 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMusclePlacentaTestisENST00000498792
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Placenta Testis
ENST00000498792 0.022±0.00 0.049±0.00 0.239±0.00 0.139±0.00 0.025±0.00 0.136±0.00 0.078±0.00 0.149±0.00 0.054±0.00 0.085±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002SH CIL_0002SH_0002 CGP 3:120164645-120349339

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046575 Ptov1-001 protein_coding Mus_musculus 0 1140
ENSMUST00000132521 Ptov1-006 retained_intron Mus_musculus 0 564
ENSMUST00000003049 Med25-201 protein_coding Mus_musculus 0 313
ENSMUST00000140732 Ptov1-002 retained_intron Mus_musculus 0 237

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