C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002T5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166822-ENSG00000183196 CGP 9606 16:75443054-75495384
GeneTranscriptPositionBiotype
ENSG00000166822 (TMEM170A)
transmembrane protein 170A 		ENST00000357613 (TMEM170A-002) 75443054-75464689 protein_coding
ENST00000561878 (TMEM170A-001) 75447019-75464698 protein_coding
ENST00000566980 (TMEM170A-005) 75447310-75464737 protein_coding
ENST00000567796 (TMEM170A-006) 75447202-75465497 protein_coding
ENST00000568559 (TMEM170A-004) 75443248-75464689 nonsense_mediated_decay
ENST00000569276 (TMEM170A-008) 75451436-75464672 protein_coding
ENST00000569540 (TMEM170A-003) 75445714-75464416 protein_coding
ENSG00000183196 (CHST6)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6 		ENST00000332272 (CHST6-003) 75472052-75495028 protein_coding
ENST00000390664 (CHST6-001) 75478428-75495384 protein_coding
ENSG00000203472 (RP11-77K12.4)
 ENST00000530512 (RP11-77K12.4-001) 75475896-75495407 antisense
ENSG00000261476 (RP11-77K12.3)
 ENST00000563554 (RP11-77K12.3-001) 75458252-75460017 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0002T5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031953-ENSMUSG00000031952 CGP 10090 8:111864898-111910199
GeneTranscriptPositionBiotype
ENSMUSG00000031952 (Chst5)
carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 		ENSMUST00000034430 (Chst5-201) 111889135-111910199 protein_coding
ENSMUSG00000031953 (Tmem170)
transmembrane protein 170 		ENSMUST00000034431 (Tmem170-201) 111864898-111876675 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002T5_0001ENSG00000166822ENST00000357613ENST00000561878ENST00000566980ENST00000567796ENST00000568559ENST00000569276ENST00000569540ENSG00000183196ENST00000332272ENST00000390664ENSG00000203472ENST00000530512ENSG00000261476ENST00000563554CIL_0002T5_0002ENSMUSG00000031952ENSMUST00000034430ENSMUSG00000031953ENSMUST00000034431
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002T5_0001ENSG00000166822ENST00000357613ENST00000568559ENST00000569540ENSG00000183196ENST00000332272ENST00000390664ENSG00000203472ENST00000530512ENSG00000261476ENST00000563554CIL_0002T5_0002ENSMUSG00000031952ENSMUST00000034430ENSMUSG00000031953ENSMUST00000034431
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166822 ENST00000357613 3.338±0.00 1.018±0.00 N/A 2.386±0.31 2.394±0.00 1.731±0.00 0.643±0.00 N/A N/A N/A 1.093±0.00 2.725±1.17 2.744±0.30 N/A
ENST00000561878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568559 1.725±0.00 2.249±0.00 N/A 1.559±0.00 1.488±0.00 1.889±0.00 0.771±0.00 2.639±0.00 1.066±0.00 1.561±0.00 N/A 2.079±0.00 N/A 4.325±0.00
ENST00000569276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569540 N/A N/A N/A N/A N/A N/A 0.747±0.00 N/A N/A N/A 0.193±0.00 N/A N/A N/A
ENSG00000183196 ENST00000332272 0.103±0.00 0.246±0.00 0.015±0.00 1.382±0.22 0.064±0.03 N/A 0.085±0.07 0.154±0.00 0.016±0.00 0.560±0.05 0.014±0.01 0.166±0.15 0.081±0.04 N/A
ENST00000390664 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.539±0.00 N/A 1.312±0.00 N/A N/A
ENSG00000203472 ENST00000530512 0.358±0.00 1.198±0.00 N/A N/A 0.277±0.00 N/A 0.565±0.00 N/A N/A N/A 0.058±0.00 N/A N/A N/A
ENSG00000261476 ENST00000563554 N/A 0.368±0.00 0.270±0.00 0.161±0.09 0.078±0.03 0.154±0.05 0.099±0.00 0.115±0.05 0.034±0.00 0.011±0.00 N/A 0.069±0.01 0.075±0.01 0.099±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031952 ENSMUST00000034430 N/A 0.055±0.00 0.110±0.05 1.120±0.64 0.136±0.06 0.817±0.16 0.013±0.00 0.034±0.01 0.030±0.03 3.339±0.67 0.032±0.01 0.268±0.16 0.420±0.23 0.255±0.14
ENSMUSG00000031953 ENSMUST00000034431 1.470±0.27 3.339±1.32 4.075±0.00 N/A 3.309±1.15 4.621±2.12 0.943±0.49 2.985±0.45 1.715±0.65 3.241±0.39 0.517±0.25 2.542±1.47 4.448±2.58 3.835±1.41

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