C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 2, 113kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557235 STAT2-001 ENSG00000170581 9606 - 12:56342936-56360126 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyOvaryENST00000557235
Transcript ID Brain Colon Kidney Ovary
ENST00000557235 1.158±0.00 1.161±0.00 3.828±0.00 1.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TG CIL_0002TG_0002 CGP 12:56341597-56362823

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0007165 IEA signal transduction
GO:0007259 TAS JAK-STAT cascade
GO:0016032 IEA viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0042802 IPI identical protein binding
GO:0051607 IEA defense response to virus
GO:0060337 TAS type I interferon signaling pathway
GO:0060338 TAS regulation of type I interferon-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105238 Stat2-202 protein_coding Mus_musculus 0 1526
ENSMUST00000085708 Stat2-201 protein_coding Mus_musculus 0 1517

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