C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101158-ENSG00000101160 CGP 9606 20:58981208-59007247
GeneTranscriptPositionBiotype
ENSG00000101158 (NELFCD)
negative elongation factor complex member C/D 		ENST00000344018 (NELFCD-201) 58981276-58995096 protein_coding
ENST00000460601 (NELFCD-010) 58981275-58995133 nonsense_mediated_decay
ENST00000464363 (NELFCD-006) 58981275-58986761 retained_intron
ENST00000471621 (NELFCD-007) 58981252-58987421 retained_intron
ENST00000474543 (NELFCD-002) 58989019-58995133 retained_intron
ENST00000477741 (NELFCD-008) 58987710-58995133 retained_intron
ENST00000478389 (NELFCD-011) 58990095-58995133 retained_intron
ENST00000479207 (NELFCD-004) 58991312-58995133 processed_transcript
ENST00000482747 (NELFCD-009) 58981275-58990400 retained_intron
ENST00000486263 (NELFCD-005) 58993923-58995133 retained_intron
ENST00000490205 (NELFCD-001) 58991037-58991922 retained_intron
ENST00000492016 (NELFCD-012) 58981252-58987969 retained_intron
ENST00000497935 (NELFCD-013) 58990896-58993544 processed_transcript
ENST00000602795 (NELFCD-003) 58981208-58995133 protein_coding
ENSG00000101160 (CTSZ)
cathepsin Z 		ENST00000217131 (CTSZ-001) 58995185-59007247 protein_coding
ENST00000472025 (CTSZ-003) 59006042-59007105 retained_intron
ENST00000488395 (CTSZ-002) 58997392-59006426 retained_intron
ENST00000503833 (CTSZ-005) 58996587-59007230 retained_intron
CIL_0002U2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000016253-ENSMUSG00000016256 CGP 10090 2:174415804-174439039
GeneTranscriptPositionBiotype
ENSMUSG00000016256 (Ctsz)
cathepsin Z 		ENSMUST00000016400 (Ctsz-001) 174427493-174439039 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U2_0001ENSG00000101158ENST00000344018ENST00000460601ENST00000464363ENST00000471621ENST00000474543ENST00000477741ENST00000478389ENST00000479207ENST00000482747ENST00000486263ENST00000490205ENST00000492016ENST00000497935ENST00000602795ENSG00000101160ENST00000217131ENST00000472025ENST00000488395ENST00000503833CIL_0002U2_0002ENSMUSG00000016256ENSMUST00000016400
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U2_0001ENSG00000101158ENST00000344018ENST00000460601ENST00000474543ENST00000477741ENST00000478389ENST00000479207ENST00000482747ENST00000497935ENST00000602795ENSG00000101160ENST00000217131ENST00000503833CIL_0002U2_0002ENSMUSG00000016256ENSMUST00000016400
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101158 ENST00000344018 N/A N/A 0.977±0.00 6.707±0.00 N/A N/A N/A 6.638±2.42 2.996±0.00 8.416±0.00 3.547±0.00 35.979±0.00 12.733±0.00 23.964±0.00
ENST00000460601 N/A N/A N/A 1.541±0.00 N/A 1.770±0.00 0.552±0.00 N/A 1.204±0.00 N/A N/A N/A N/A N/A
ENST00000464363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471621 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.950±0.00 N/A N/A
ENST00000477741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.409±0.00 N/A N/A N/A
ENST00000478389 N/A 3.667±0.00 N/A N/A N/A 0.574±0.00 1.149±0.00 N/A N/A N/A 0.289±0.00 2.803±0.00 N/A N/A
ENST00000479207 N/A 9.856±0.00 N/A N/A N/A N/A N/A N/A 4.703±0.00 N/A N/A N/A N/A N/A
ENST00000482747 N/A N/A N/A N/A 3.431±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.368±4.52 144.518±0.00 77.350±0.00 120.470±0.00
ENST00000602795 20.166±0.00 13.991±0.00 1.282±0.00 8.542±3.92 12.647±9.16 9.091±7.07 4.482±3.54 11.964±10.44 5.762±3.57 7.840±2.63 11.854±0.00 19.227±6.94 20.925±8.45 39.897±0.00
ENSG00000101160 ENST00000217131 95.925±0.00 151.743±0.00 5.949±0.00 17.847±15.00 93.760±79.42 56.231±45.31 37.847±33.56 52.664±25.21 67.169±56.41 83.144±69.01 15.499±10.22 124.889±69.12 195.539±48.83 25.782±22.18
ENST00000472025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 115.303±0.00 180.790±0.00 20.876±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016256 ENSMUST00000016400 146.326±22.61 119.100±25.17 60.901±0.05 28.128±3.18 144.325±31.30 127.870±8.68 21.502±1.91 116.990±4.39 116.522±44.18 116.335±2.94 15.049±1.58 135.790±23.97 153.641±76.21 5.295±0.23

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