C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002YR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000020596-ENSDARG00000016163 CGP 7955 2:8447449-8561837
GeneTranscriptPositionBiotype
ENSDARG00000016163 (usp33)
ubiquitin specific peptidase 33 		ENSDART00000018114 (usp33-001) 8501496-8561837 protein_coding
ENSDART00000133037 (usp33-002) 8501513-8516163 protein_coding
ENSDART00000137872 (usp33-003) 8501506-8510413 protein_coding
ENSDARG00000020596 (fam73a)
family with sequence similarity 73, member A 		ENSDART00000010257 (fam73a-001) 8447449-8473100 protein_coding
ENSDART00000143884 (fam73a-002) 8465283-8469274 processed_transcript
CIL_0002YR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000054942-ENSMUSG00000025437 CGP 10090 3:152273459-152393612
GeneTranscriptPositionBiotype
ENSMUSG00000025437 (Usp33)
ubiquitin specific peptidase 33 		ENSMUST00000026507 (Usp33-001) 152346478-152393612 protein_coding
ENSMUST00000117492 (Usp33-002) 152346489-152393330 protein_coding
ENSMUST00000123237 (Usp33-003) 152346512-152371905 nonsense_mediated_decay
ENSMUST00000138575 (Usp33-005) 152361898-152368491 processed_transcript
ENSMUST00000142969 (Usp33-004) 152346515-152358348 retained_intron
ENSMUSG00000054942 (Fam73a)
family with sequence similarity 73, member A 		ENSMUST00000068243 (Fam73a-201) 152273459-152340407 protein_coding
ENSMUST00000073089 (Fam73a-202) 152273459-152340407 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YR_0001ENSDARG00000016163ENSDART00000018114ENSDART00000133037ENSDART00000137872ENSDARG00000020596ENSDART00000010257ENSDART00000143884CIL_0002YR_0002ENSMUSG00000025437ENSMUST00000026507ENSMUST00000117492ENSMUST00000123237ENSMUST00000138575ENSMUST00000142969ENSMUSG00000054942ENSMUST00000068243ENSMUST00000073089
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YR_0001ENSDARG00000016163ENSDART00000018114ENSDARG00000020596ENSDART00000010257CIL_0002YR_0002ENSMUSG00000025437ENSMUST00000026507ENSMUST00000117492ENSMUST00000138575ENSMUSG00000054942ENSMUST00000068243ENSMUST00000073089
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016163 ENSDART00000018114 N/A N/A N/A 33.697±6.15 N/A N/A 4.622±4.50 5.104±5.06 1.069±0.00 N/A 3.881±0.00 N/A N/A N/A
ENSDART00000133037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000020596 ENSDART00000010257 N/A N/A N/A 7.893±1.11 N/A N/A 37.635±25.84 14.918±9.26 3.550±0.00 N/A 14.647±0.00 N/A N/A N/A
ENSDART00000143884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025437 ENSMUST00000026507 1.597±0.00 1.738±0.50 1.941±0.61 4.490±0.94 1.717±0.66 1.609±0.37 0.805±0.05 1.637±0.00 2.369±0.95 3.596±0.00 0.871±0.11 1.640±0.65 2.973±0.37 N/A
ENSMUST00000117492 5.999±0.35 3.768±1.11 11.431±1.27 27.675±2.71 3.626±1.83 5.051±1.78 3.048±0.51 6.274±0.49 7.852±4.57 7.210±2.10 4.109±0.44 9.901±9.34 14.646±2.17 3.039±0.15
ENSMUST00000123237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.189±0.00
ENSMUST00000142969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054942 ENSMUST00000068243 0.324±0.22 4.734±1.24 N/A 1.195±0.28 2.119±0.32 2.370±0.87 1.152±0.21 2.475±0.32 0.359±0.19 2.567±0.63 N/A 4.261±1.22 1.065±0.00 0.798±0.10
ENSMUST00000073089 1.264±0.86 N/A 1.599±0.13 6.849±4.44 0.940±0.38 1.091±0.36 1.638±0.60 3.274±0.47 1.628±1.37 3.233±0.58 1.157±0.38 2.655±0.73 4.166±0.97 0.617±0.24

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