C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule associated monooxygenase, calponin and LIM domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098457 Mical3-001 ENSMUSG00000051586 10090 - 6:120931707-121003152 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098457 2.028±0.00 4.111±1.74 2.568±0.00 6.385±4.01 1.490±0.42 1.266±0.05 4.763±1.69 2.209±1.63 0.531±0.22 1.405±0.00 0.946±0.00 3.372±0.56 2.651±1.65 1.809±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z7 CIL_0002Z7_0002 CGP 6:120891930-121003153

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 ISS actin binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006887 IEA exocytosis
GO:0007010 ISS cytoskeleton organization
GO:0008270 IEA zinc ion binding
GO:0016709 ISS oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0030042 ISS actin filament depolymerization
GO:0055114 ISS oxidation-reduction process
GO:0071949 ISS FAD binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252134 MICAL3-014 retained_intron Homo_sapiens 0 497
ENST00000441493 MICAL3-010 protein_coding Homo_sapiens 0 2676
ENST00000577821 MICAL3-015 protein_coding Homo_sapiens 0 257
ENST00000580469 MICAL3-013 processed_transcript Homo_sapiens 0 580

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