C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00032E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000038865-ENSDARG00000010925 CGP 7955 7:62402896-62485236
GeneTranscriptPositionBiotype
ENSDARG00000010925 (HTRA3 (1 of 3))
HtrA serine peptidase 3 		ENSDART00000023770 (HTRA3 (1 of 3)-201) 62460153-62485236 protein_coding
ENSDARG00000038865 (acox3)
acyl-Coenzyme A oxidase 3, pristanoyl 		ENSDART00000056745 (acox3-201) 62402896-62437144 protein_coding
CIL_00032E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029098-ENSMUSG00000029096 CGP 10090 5:35583040-35679782
GeneTranscriptPositionBiotype
ENSMUSG00000029096 (Htra3)
HtrA serine peptidase 3 		ENSMUST00000087629 (Htra3-001) 35652041-35679782 protein_coding
ENSMUST00000114233 (Htra3-002) 35661559-35679472 protein_coding
ENSMUST00000129459 (Htra3-004) 35668193-35671552 processed_transcript
ENSMUST00000137935 (Htra3-003) 35668230-35671553 processed_transcript
ENSMUSG00000029098 (Acox3)
acyl-Coenzyme A oxidase 3, pristanoyl 		ENSMUST00000068563 (Acox3-003) 35583102-35611900 protein_coding
ENSMUST00000068947 (Acox3-001) 35583040-35613801 protein_coding
ENSMUST00000114237 (Acox3-005) 35583051-35612607 protein_coding
ENSMUST00000114238 (Acox3-004) 35583706-35611869 protein_coding
ENSMUST00000127641 (Acox3-002) 35583092-35587419 retained_intron
ENSMUST00000154796 (Acox3-007) 35606959-35609919 processed_transcript
ENSMUST00000156125 (Acox3-006) 35583078-35588724 protein_coding
ENSMUSG00000055061 (4931431C16Rik)
RIKEN cDNA 4931431C16 gene 		ENSMUST00000124643 (4931431C16Rik-001) 35581227-35588763 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00032E_0001ENSDARG00000010925ENSDART00000023770ENSDARG00000038865ENSDART00000056745CIL_00032E_0002ENSMUSG00000029096ENSMUST00000087629ENSMUST00000114233ENSMUST00000129459ENSMUST00000137935ENSMUSG00000029098ENSMUST00000068563ENSMUST00000068947ENSMUST00000114237ENSMUST00000114238ENSMUST00000127641ENSMUST00000154796ENSMUST00000156125ENSMUSG00000055061ENSMUST00000124643
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00032E_0001ENSDARG00000010925ENSDART00000023770ENSDARG00000038865ENSDART00000056745CIL_00032E_0002ENSMUSG00000029096ENSMUST00000087629ENSMUST00000114233ENSMUST00000129459ENSMUSG00000029098ENSMUST00000068563ENSMUST00000068947ENSMUSG00000055061ENSMUST00000124643
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010925 ENSDART00000023770 N/A N/A N/A 0.722±0.26 N/A N/A 0.416±0.05 0.971±0.00 N/A N/A 1.100±0.00 N/A N/A N/A
ENSDARG00000038865 ENSDART00000056745 N/A N/A N/A 2.277±2.04 N/A N/A 5.207±1.42 17.092±0.00 3.278±0.00 N/A 2.187±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029096 ENSMUST00000087629 122.235±31.30 26.703±6.97 47.005±0.69 3.446±0.76 116.011±18.17 24.533±4.15 35.870±5.15 3.476±0.73 0.418±0.16 17.146±2.38 4.583±1.23 63.406±19.95 17.199±12.33 4.089±2.08
ENSMUST00000114233 48.162±0.68 34.015±18.31 N/A 0.645±0.00 59.018±3.12 6.517±1.11 8.232±0.00 0.774±0.10 0.133±0.04 5.370±1.51 2.606±0.50 41.241±24.15 N/A 1.263±0.06
ENSMUST00000129459 N/A N/A N/A N/A N/A N/A N/A N/A 0.545±0.13 N/A N/A N/A N/A N/A
ENSMUST00000137935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000029098 ENSMUST00000068563 2.694±0.00 4.045±0.00 N/A N/A N/A 3.079±0.00 N/A N/A 0.711±0.20 3.167±0.00 N/A N/A 0.623±0.01 3.804±0.34
ENSMUST00000068947 9.367±0.80 17.286±4.06 5.091±1.03 5.324±1.82 7.448±2.16 6.170±1.95 3.898±1.20 23.452±2.38 2.964±1.99 10.063±2.24 4.658±1.13 8.044±3.08 2.978±0.80 10.223±2.46
ENSMUST00000114237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000055061 ENSMUST00000124643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.291±0.00

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