C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00034Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105248-ENSG00000105251 CGP 9606 19:4247079-4290724
GeneTranscriptPositionBiotype
ENSG00000105248 (CCDC94)
coiled-coil domain containing 94
ENST00000262962 (CCDC94-001) 4247079-4269090 protein_coding
ENST00000596496 (CCDC94-002) 4248015-4258423 protein_coding
ENSG00000105251 (SHD)
Src homology 2 domain containing transforming protein D
ENST00000543264 (SHD-001) 4278601-4290724 protein_coding
ENST00000593383 (SHD-003) 4283083-4290653 nonsense_mediated_decay
ENST00000597466 (SHD-005) 4288192-4290564 retained_intron
ENST00000599689 (SHD-002) 4279296-4290691 protein_coding
ENST00000600475 (SHD-004) 4284431-4288314 processed_transcript
CIL_00034Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003208-ENSMUSG00000039154 CGP 10090 17:55959187-55976617
GeneTranscriptPositionBiotype
ENSMUSG00000003208 (Ccdc94)
coiled-coil domain containing 94
ENSMUST00000086869 (Ccdc94-201) 55959187-55967949 protein_coding
ENSMUSG00000039154 (Shd)
src homology 2 domain-containing transforming protein D
ENSMUST00000044216 (Shd-201) 55970467-55976617 protein_coding
ENSMUSG00000097077 (Gm16712)
predicted gene, 16712
ENSMUST00000181962 (Gm16712-201) 55954771-55959381 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034Q_0001ENSG00000105248ENST00000262962ENST00000596496ENSG00000105251ENST00000543264ENST00000593383ENST00000597466ENST00000599689ENST00000600475CIL_00034Q_0002ENSMUSG00000003208ENSMUST00000086869ENSMUSG00000039154ENSMUST00000044216ENSMUSG00000097077ENSMUST00000181962
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00034Q_0001ENSG00000105248ENST00000262962ENST00000596496ENSG00000105251ENST00000543264ENST00000593383ENST00000597466ENST00000599689ENST00000600475CIL_00034Q_0002ENSMUSG00000003208ENSMUST00000086869ENSMUSG00000039154ENSMUST00000044216ENSMUSG00000097077ENSMUST00000181962
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105248 ENST00000262962 8.265±0.00 23.778±0.00 0.252±0.00 6.147±3.06 7.347±6.27 4.687±2.79 2.872±2.02 5.934±4.07 5.195±3.07 3.629±2.76 5.049±3.23 16.923±8.54 16.800±5.53 12.409±3.62
ENST00000596496 N/A N/A 0.699±0.00 1.018±0.00 0.220±0.00 N/A 0.224±0.00 N/A 0.969±0.00 0.875±0.00 N/A 5.874±3.49 10.087±0.00 14.066±0.00
ENSG00000105251 ENST00000543264 N/A N/A N/A 0.178±0.00 N/A N/A N/A N/A N/A N/A N/A 0.122±0.00 N/A 0.083±0.00
ENST00000593383 N/A N/A N/A 3.490±0.00 N/A 1.364±0.81 N/A N/A 1.457±0.00 N/A N/A N/A N/A 0.208±0.00
ENST00000597466 N/A N/A N/A N/A N/A 1.998±0.00 N/A 1.093±0.00 2.561±0.00 N/A N/A 1.571±0.00 N/A N/A
ENST00000599689 N/A 0.022±0.00 N/A 2.557±2.31 N/A N/A 0.356±0.05 N/A 0.246±0.00 0.024±0.00 N/A 0.088±0.00 N/A 0.070±0.00
ENST00000600475 N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.484±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000003208 ENSMUST00000086869 3.862±0.61 2.660±0.92 7.055±0.89 11.573±7.95 3.275±1.36 4.186±1.29 1.508±0.19 3.757±0.36 4.096±2.15 5.037±0.66 2.955±0.60 8.275±6.95 9.733±4.50 4.684±5.55
ENSMUSG00000039154 ENSMUST00000044216 1.379±1.24 1.077±0.50 0.473±0.00 41.086±20.81 0.367±0.13 0.613±0.28 0.428±0.18 5.373±1.29 0.117±0.12 0.392±0.10 0.104±0.04 0.901±0.53 0.196±0.07 0.168±0.06
ENSMUSG00000097077 ENSMUST00000181962 N/A N/A N/A 0.581±0.00 0.208±0.00 N/A N/A N/A 0.976±0.00 N/A N/A N/A N/A 0.394±0.03

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