C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000367_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000151116-ENSG00000179119 CGP 9606 11:18529609-18634791
GeneTranscriptPositionBiotype
ENSG00000179119 (SPTY2D1)
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 		ENST00000336349 (SPTY2D1-001) 18606401-18634493 protein_coding
ENST00000536336 (SPTY2D1-002) 18612165-18634389 retained_intron
ENST00000543776 (SPTY2D1-005) 18615773-18634791 processed_transcript
ENSG00000256282 (RP11-504G3.4)
 ENST00000534919 (RP11-504G3.4-002) 18595904-18599594 processed_transcript
ENST00000540985 (RP11-504G3.4-001) 18595629-18596571 transcribed_processed_pseudogene
ENST00000541939 (RP11-504G3.4-003) 18595459-18599683 processed_transcript
ENSG00000274589 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616888 (Metazoa_SRP.1-286) 18538885-18539189 misc_RNA
ENSG00000279837 (RP11-504G3.2)
 ENST00000623697 (RP11-504G3.2-001) 18601882-18602649 TEC
CIL_000367_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043262-ENSMUSG00000049516 CGP 10090 7:46923539-47008411
GeneTranscriptPositionBiotype
ENSMUSG00000043262 (Uevld)
UEV and lactate/malate dehyrogenase domains 		ENSMUST00000094398 (Uevld-001) 46923539-46958527 protein_coding
ENSMUST00000125026 (Uevld-003) 46947645-46958472 retained_intron
ENSMUST00000131183 (Uevld-002) 46923539-46958527 nonsense_mediated_decay
ENSMUST00000133063 (Uevld-004) 46946001-46956037 retained_intron
ENSMUST00000133914 (Uevld-005) 46948018-46958501 nonsense_mediated_decay
ENSMUSG00000049516 (Spty2d1)
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) 		ENSMUST00000061639 (Spty2d1-001) 46990396-47008411 protein_coding
ENSMUSG00000056509 (Gm9999)
predicted gene 9999 		ENSMUST00000070660 (Gm9999-002) 46983580-46987795 lincRNA
ENSMUST00000185832 (Gm9999-001) 46986820-46987796 lincRNA
ENSMUST00000188312 (Gm9999-003) 46983661-46987803 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000367_0001ENSG00000179119ENST00000336349ENST00000536336ENST00000543776ENSG00000256282ENST00000534919ENST00000540985ENST00000541939ENSG00000274589ENST00000616888ENSG00000279837ENST00000623697CIL_000367_0002ENSMUSG00000043262ENSMUST00000094398ENSMUST00000125026ENSMUST00000131183ENSMUST00000133063ENSMUST00000133914ENSMUSG00000049516ENSMUST00000061639ENSMUSG00000056509ENSMUST00000070660ENSMUST00000185832ENSMUST00000188312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000367_0001ENSG00000179119ENST00000336349ENST00000536336ENST00000543776ENSG00000256282ENST00000534919ENST00000540985ENST00000541939ENSG00000274589ENST00000616888ENSG00000279837ENST00000623697CIL_000367_0002ENSMUSG00000043262ENSMUST00000094398ENSMUST00000131183ENSMUSG00000049516ENSMUST00000061639ENSMUSG00000056509ENSMUST00000070660ENSMUST00000185832ENSMUST00000188312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179119 ENST00000336349 0.966±0.00 1.175±0.00 0.907±0.00 1.626±0.34 1.674±0.14 1.087±0.55 1.125±0.91 1.915±0.00 1.634±0.00 2.220±1.16 1.766±1.49 2.598±1.08 2.517±0.13 3.160±0.00
ENST00000536336 N/A N/A 1.271±0.00 0.828±0.00 N/A 1.869±0.00 0.729±0.00 N/A 1.965±0.00 1.381±0.00 N/A 2.054±0.00 N/A N/A
ENST00000543776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.854±0.00 N/A N/A N/A
ENSG00000256282 ENST00000534919 N/A 0.314±0.00 N/A N/A 0.253±0.00 N/A N/A N/A 0.026±0.00 0.260±0.00 N/A N/A N/A 7.756±6.74
ENST00000540985 0.092±0.00 0.078±0.00 N/A 0.131±0.00 0.572±0.00 N/A 0.240±0.15 0.294±0.10 N/A N/A 0.084±0.00 0.478±0.56 N/A 0.165±0.00
ENST00000541939 N/A N/A N/A 0.027±0.00 0.169±0.00 0.024±0.00 0.129±0.04 N/A N/A N/A N/A 0.091±0.04 0.086±0.00 2.231±1.58
ENSG00000274589 ENST00000616888 0.190±0.00 0.439±0.00 N/A 0.215±0.00 0.744±0.00 0.222±0.00 0.184±0.00 N/A 0.113±0.00 0.278±0.00 0.057±0.00 0.570±0.00 0.426±0.00 0.394±0.25
ENSG00000279837 ENST00000623697 0.032±0.00 0.092±0.00 N/A 0.065±0.00 0.132±0.00 N/A 0.131±0.07 0.586±0.00 N/A 0.281±0.06 0.319±0.28 0.307±0.12 0.103±0.04 0.231±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000043262 ENSMUST00000094398 4.146±0.47 2.392±0.56 4.378±0.40 1.904±0.64 3.222±0.44 2.640±0.63 1.790±0.15 3.011±0.27 3.078±0.74 3.082±0.52 1.855±0.35 3.404±0.98 7.947±2.72 1.343±0.55
ENSMUST00000125026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131183 0.497±0.00 N/A N/A 0.340±0.00 N/A N/A 0.319±0.00 N/A N/A 0.433±0.00 N/A N/A N/A 0.310±0.00
ENSMUST00000133063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049516 ENSMUST00000061639 3.758±1.08 5.688±0.98 5.008±0.39 2.028±0.73 4.455±1.64 6.284±0.24 1.479±0.22 4.442±0.47 3.985±1.35 5.222±0.70 0.919±0.16 7.886±0.82 12.415±2.29 1.949±1.09
ENSMUSG00000056509 ENSMUST00000070660 N/A N/A N/A N/A N/A N/A N/A 0.114±0.00 N/A N/A N/A N/A 0.205±0.00 166.014±27.76
ENSMUST00000185832 N/A N/A N/A N/A N/A N/A 0.382±0.23 0.248±0.09 0.037±0.00 0.205±0.00 N/A N/A 0.488±0.31 462.185±122.93
ENSMUST00000188312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.574±0.00 N/A 378.394±0.00

Loading