C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000061639 Spty2d1-001 ENSMUSG00000049516 10090 - 7:46990396-47008411 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061639 3.758±1.08 5.688±0.98 5.008±0.39 2.028±0.73 4.455±1.64 6.284±0.24 1.479±0.22 4.442±0.47 3.985±1.35 5.222±0.70 0.919±0.16 7.886±0.82 12.415±2.29 1.949±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000367 CIL_000367_0002 CGP 7:46923539-47008411
CIL_00041C CIL_00041C_0003 CGP 7:46990396-47054776

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336349 SPTY2D1-001 protein_coding Homo_sapiens 0 2174
ENST00000396065 GCNT3-001 protein_coding Homo_sapiens 0.0003 53
ENST00000536336 SPTY2D1-002 retained_intron Homo_sapiens 0 1803
ENST00000543776 SPTY2D1-005 processed_transcript Homo_sapiens 0 442

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