C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00036V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000278195-ENSG00000128340 CGP 9606 22:37204238-37244448
GeneTranscriptPositionBiotype
ENSG00000128340 (RAC2)
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) 		ENST00000249071 (RAC2-001) 37225261-37244270 protein_coding
ENST00000401529 (RAC2-002) 37240805-37244248 protein_coding
ENST00000405484 (RAC2-007) 37226673-37244432 protein_coding
ENST00000406508 (RAC2-004) 37225852-37244448 protein_coding
ENST00000441619 (RAC2-003) 37226753-37244441 protein_coding
ENST00000469532 (RAC2-006) 37232404-37244278 retained_intron
ENST00000481215 (RAC2-008) 37225966-37231503 retained_intron
ENSG00000278195 (SSTR3)
somatostatin receptor 3 		ENST00000610913 (SSTR3-001) 37204238-37212322 protein_coding
ENST00000617123 (SSTR3-002) 37206480-37210965 protein_coding
CIL_00036V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000044933-ENSMUSG00000033220 CGP 10090 15:78537015-78572783
GeneTranscriptPositionBiotype
ENSMUSG00000033220 (Rac2)
RAS-related C3 botulinum substrate 2 		ENSMUST00000043214 (Rac2-201) 78559169-78572783 protein_coding
ENSMUSG00000044933 (Sstr3)
somatostatin receptor 3 		ENSMUST00000053239 (Sstr3-201) 78537015-78544345 protein_coding
ENSMUSG00000068226 (Gm6723)
predicted pseudogene 6723 		ENSMUST00000180449 (Gm6723-001) 78554408-78554848 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036V_0001ENSG00000128340ENST00000249071ENST00000401529ENST00000405484ENST00000406508ENST00000441619ENST00000469532ENST00000481215ENSG00000278195ENST00000610913ENST00000617123CIL_00036V_0002ENSMUSG00000033220ENSMUST00000043214ENSMUSG00000044933ENSMUST00000053239ENSMUSG00000068226ENSMUST00000180449
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00036V_0001ENSG00000128340ENST00000249071ENST00000401529ENST00000406508ENST00000441619ENST00000481215ENSG00000278195ENST00000610913ENST00000617123CIL_00036V_0002ENSMUSG00000033220ENSMUST00000043214ENSMUSG00000044933ENSMUST00000053239ENSMUSG00000068226ENSMUST00000180449
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128340 ENST00000249071 9.663±0.00 101.928±0.00 0.307±0.00 1.031±0.99 7.477±0.00 2.532±0.18 1.604±1.52 3.409±0.00 2.425±1.72 33.498±30.03 0.600±0.55 10.226±5.24 13.262±6.22 2.443±1.97
ENST00000401529 N/A N/A N/A N/A 1.201±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406508 N/A N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A N/A 0.351±0.00 10.369±0.00 N/A N/A
ENST00000441619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.262±0.00 9.170±0.00 0.449±0.00
ENST00000469532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481215 N/A N/A N/A N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A N/A N/A N/A
ENSG00000278195 ENST00000610913 0.022±0.00 0.726±0.00 N/A 2.079±1.27 0.053±0.00 0.023±0.00 N/A N/A N/A 0.056±0.02 N/A 3.574±5.43 N/A 3.382±1.14
ENST00000617123 N/A N/A N/A N/A N/A 0.033±0.00 N/A 0.240±0.00 N/A N/A N/A N/A 0.045±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033220 ENSMUST00000043214 13.841±5.23 7.684±1.10 5.374±0.47 0.625±0.31 134.640±77.78 15.862±2.88 3.101±2.16 7.385±5.55 26.018±19.76 17.181±8.66 0.770±1.38 9.139±5.33 0.722±0.53 1.222±0.33
ENSMUSG00000044933 ENSMUST00000053239 0.031±0.02 0.477±0.45 0.071±0.00 2.395±2.84 0.044±0.02 0.487±0.07 0.693±0.00 0.093±0.03 0.014±0.00 0.101±0.02 0.036±0.01 0.992±0.63 0.068±0.06 1.057±0.20
ENSMUSG00000068226 ENSMUST00000180449 0.216±0.08 0.215±0.00 0.409±0.13 0.130±0.00 0.584±0.27 0.326±0.21 0.449±0.36 0.429±0.20 N/A 0.277±0.18 0.181±0.01 0.491±0.22 0.830±0.56 1.403±0.55

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