C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00037I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133169-ENSG00000147206 CGP 9606 X:103062651-103093125
GeneTranscriptPositionBiotype
ENSG00000133169 (BEX1)
brain expressed, X-linked 1
ENST00000372728 (BEX1-001) 103062651-103064240 protein_coding
ENSG00000147206 (NXF3)
nuclear RNA export factor 3
ENST00000395065 (NXF3-001) 103075810-103093125 protein_coding
ENST00000427570 (NXF3-002) 103077735-103083672 protein_coding
ENST00000460791 (NXF3-004) 103082096-103083480 retained_intron
ENST00000468528 (NXF3-007) 103076276-103079727 retained_intron
ENST00000470724 (NXF3-008) 103077675-103080148 retained_intron
ENST00000494300 (NXF3-006) 103079383-103080734 retained_intron
ENST00000497850 (NXF3-003) 103075824-103081735 retained_intron
ENSG00000226241 (LL0XNC01-221F2.2)
ENST00000440243 (LL0XNC01-221F2.2-001) 103087198-103089277 processed_pseudogene
CIL_00037I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042750-ENSMUSG00000057000 CGP 10090 X:136066564-136085255
GeneTranscriptPositionBiotype
ENSMUSG00000042750 (Bex2)
brain expressed X-linked 2
ENSMUST00000049130 (Bex2-001) 136066564-136068236 protein_coding
ENSMUSG00000057000 (Nxf3)
nuclear RNA export factor 3
ENSMUST00000080929 (Nxf3-001) 136072099-136085255 protein_coding
ENSMUST00000138878 (Nxf3-002) 136079613-136085242 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037I_0001ENSG00000133169ENST00000372728ENSG00000147206ENST00000395065ENST00000427570ENST00000460791ENST00000468528ENST00000470724ENST00000494300ENST00000497850ENSG00000226241ENST00000440243CIL_00037I_0002ENSMUSG00000042750ENSMUST00000049130ENSMUSG00000057000ENSMUST00000080929ENSMUST00000138878
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037I_0001ENSG00000133169ENST00000372728ENSG00000147206ENST00000395065ENST00000427570ENST00000460791ENST00000468528ENST00000470724ENST00000494300ENST00000497850ENSG00000226241ENST00000440243CIL_00037I_0002ENSMUSG00000042750ENSMUST00000049130ENSMUSG00000057000ENSMUST00000080929ENSMUST00000138878
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133169 ENST00000372728 1.367±0.00 1.599±0.00 1.347±0.00 173.037±92.47 0.382±0.10 5.826±0.00 3.323±0.00 2.550±2.28 0.765±0.55 0.880±0.74 0.184±0.07 8.355±9.29 0.563±0.33 53.374±13.23
ENSG00000147206 ENST00000395065 N/A N/A N/A N/A N/A N/A 0.026±0.00 0.104±0.06 0.095±0.00 1.163±0.92 N/A 0.588±0.55 0.051±0.02 7.531±2.33
ENST00000427570 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.191±0.00 N/A N/A N/A N/A N/A
ENST00000460791 N/A N/A N/A 0.030±0.00 0.075±0.00 N/A 0.050±0.00 N/A N/A N/A N/A 0.135±0.00 N/A N/A
ENST00000468528 N/A 0.173±0.00 N/A N/A N/A N/A N/A 0.237±0.00 N/A N/A 0.125±0.00 0.096±0.00 0.259±0.00 6.226±0.00
ENST00000470724 N/A 0.030±0.00 N/A 0.020±0.00 0.174±0.00 N/A N/A N/A N/A N/A 0.126±0.00 N/A 0.039±0.00 N/A
ENST00000494300 N/A N/A N/A N/A 0.138±0.00 N/A N/A N/A 0.294±0.00 N/A N/A 0.115±0.06 0.103±0.00 N/A
ENST00000497850 N/A 0.028±0.00 N/A 0.043±0.00 N/A N/A 0.059±0.00 0.041±0.00 N/A N/A N/A 0.388±0.36 N/A 5.524±0.00
ENSG00000226241 ENST00000440243 N/A N/A 0.094±0.00 N/A 0.050±0.05 N/A N/A N/A N/A N/A N/A 0.007±0.00 0.015±0.00 0.091±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042750 ENSMUST00000049130 0.404±0.35 1.914±0.33 0.719±0.00 146.116±48.14 0.137±0.08 1.654±0.24 0.157±0.13 0.635±0.24 45.686±35.35 11.224±1.24 N/A 3.442±1.81 55.532±70.11 3.414±2.74
ENSMUSG00000057000 ENSMUST00000080929 0.029±0.01 0.056±0.00 0.028±0.01 0.026±0.01 N/A N/A 0.024±0.00 0.017±0.01 0.321±0.07 0.040±0.03 N/A 0.367±0.17 0.046±0.02 12.381±9.62
ENSMUST00000138878 0.089±0.00 N/A N/A N/A N/A N/A 0.110±0.04 N/A N/A N/A N/A 0.616±0.25 0.126±0.00 3.647±0.00

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