C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear RNA export factor 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057000 Nxf3 10090 - X:136072099-136085255 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000080929 Nxf3-001 136072099-136085255 protein_coding
  ENSMUST00000138878 Nxf3-002 136079613-136085242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000080929ENSMUST00000138878
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000080929 0.029±0.01 0.056±0.00 0.028±0.01 0.026±0.01 0.024±0.00 0.017±0.01 0.321±0.07 0.040±0.03 0.367±0.17 0.046±0.02 12.381±9.62
ENSMUST00000138878 0.089±0.00 N/A N/A N/A 0.110±0.04 N/A N/A N/A 0.616±0.25 0.126±0.00 3.647±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037I CIL_00037I_0002 CGP X:136066564-136085255
CIL_000376 CIL_000376_0002 CGP X:136072099-136140443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003729 IDA mRNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0016973 IPI poly(A)+ mRNA export from nucleus
GO:0042272 IEA nuclear RNA export factor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055076 nxf1 nuclear RNA export factor 1 protein_coding Danio_rerio
ENSDARG00000086017 NXF1 (2 of 4) protein_coding Danio_rerio
ENSDARG00000089034 NXF1 (3 of 4) protein_coding Danio_rerio
ENSDARG00000095404 NXF1 (4 of 4) protein_coding Danio_rerio
ENSG00000147206 NXF3 nuclear RNA export factor 3 protein_coding Homo_sapiens

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