C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00037W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088826-ENSG00000171873 CGP 9606 20:4120980-4249074
GeneTranscriptPositionBiotype
ENSG00000171873 (ADRA1D)
adrenoceptor alpha 1D 		ENST00000379453 (ADRA1D-001) 4220631-4249074 protein_coding
ENST00000621688 (ADRA1D-002) 4221681-4222381 processed_transcript
ENSG00000230176 (LINC01433)
long intergenic non-protein coding RNA 1433 		ENST00000419003 (LINC01433-001) 4193065-4195943 antisense
CIL_00037W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027333-ENSMUSG00000027335 CGP 10090 2:131491496-131562283
GeneTranscriptPositionBiotype
ENSMUSG00000027333 (Smox)
spermine oxidase 		ENSMUST00000028806 (Smox-001) 131491764-131525183 protein_coding
ENSMUST00000110179 (Smox-003) 131491943-131525172 protein_coding
ENSMUST00000110180 (Smox-009) 131491993-131525167 protein_coding
ENSMUST00000110181 (Smox-010) 131491964-131525922 protein_coding
ENSMUST00000110182 (Smox-006) 131491943-131525172 protein_coding
ENSMUST00000110183 (Smox-007) 131491943-131525172 protein_coding
ENSMUST00000110186 (Smox-008) 131491943-131525172 protein_coding
ENSMUST00000110188 (Smox-011) 131491943-131525172 protein_coding
ENSMUST00000110189 (Smox-005) 131491943-131525172 protein_coding
ENSMUST00000129143 (Smox-012) 131491496-131520243 protein_coding
ENSMUST00000131698 (Smox-014) 131492264-131512177 protein_coding
ENSMUST00000149180 (Smox-015) 131508952-131512214 processed_transcript
ENSMUST00000151143 (Smox-017) 131521899-131525141 retained_intron
ENSMUST00000151627 (Smox-004) 131491943-131525172 retained_intron
ENSMUST00000183575 (Smox-013) 131491923-131520282 nonsense_mediated_decay
ENSMUST00000183881 (Smox-016) 131520186-131524879 nonsense_mediated_decay
ENSMUST00000183947 (Smox-002) 131491943-131525172 nonsense_mediated_decay
ENSMUSG00000027335 (Adra1d)
adrenergic receptor, alpha 1d 		ENSMUST00000103184 (Adra1d-001) 131545850-131562283 protein_coding
ENSMUSG00000087524 (Gm14285)
predicted gene 14285 		ENSMUST00000146049 (Gm14285-001) 131561614-131563179 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037W_0001ENSG00000171873ENST00000379453ENST00000621688ENSG00000230176ENST00000419003CIL_00037W_0002ENSMUSG00000027333ENSMUST00000028806ENSMUST00000110179ENSMUST00000110180ENSMUST00000110181ENSMUST00000110182ENSMUST00000110183ENSMUST00000110186ENSMUST00000110188ENSMUST00000110189ENSMUST00000129143ENSMUST00000131698ENSMUST00000149180ENSMUST00000151143ENSMUST00000151627ENSMUST00000183575ENSMUST00000183881ENSMUST00000183947ENSMUSG00000027335ENSMUST00000103184ENSMUSG00000087524ENSMUST00000146049
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00037W_0001ENSG00000171873ENST00000379453ENST00000621688ENSG00000230176ENST00000419003CIL_00037W_0002ENSMUSG00000027333ENSMUST00000028806ENSMUST00000110179ENSMUST00000110180ENSMUST00000110186ENSMUST00000110188ENSMUST00000110189ENSMUST00000151143ENSMUST00000151627ENSMUST00000183947ENSMUSG00000027335ENSMUST00000103184ENSMUSG00000087524ENSMUST00000146049
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000171873 ENST00000379453 0.400±0.00 1.355±0.00 N/A 0.936±0.59 0.389±0.00 0.642±0.00 0.012±0.00 0.185±0.00 0.298±0.00 1.185±0.00 0.101±0.00 0.549±0.48 0.166±0.08 0.898±0.57
ENST00000621688 N/A N/A N/A 2.687±0.00 N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A 1.461±0.00
ENSG00000230176 ENST00000419003 N/A N/A N/A 0.032±0.00 0.060±0.00 N/A 0.053±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027333 ENSMUST00000028806 5.369±2.99 4.779±1.28 4.734±1.89 12.449±2.67 3.798±0.65 10.368±1.66 4.899±0.88 2.705±0.33 12.450±12.86 4.198±1.34 124.190±29.61 8.450±3.94 3.460±1.66 3.788±0.99
ENSMUST00000110179 N/A N/A N/A N/A N/A N/A N/A N/A 19.352±9.52 N/A N/A N/A N/A N/A
ENSMUST00000110180 N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.06 N/A N/A 3.863±0.87 6.068±0.00 N/A
ENSMUST00000110181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110186 3.178±0.75 2.471±0.87 1.976±0.31 8.126±0.00 3.008±0.51 9.004±1.83 2.794±0.83 1.604±0.20 7.618±7.28 4.222±0.36 N/A 6.073±1.23 5.295±3.77 1.076±0.46
ENSMUST00000110188 1.312±0.00 1.256±0.00 N/A N/A N/A N/A N/A N/A 0.403±0.00 N/A 55.372±10.87 2.412±0.00 5.909±0.00 1.277±0.00
ENSMUST00000110189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.180±0.50
ENSMUST00000129143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151143 N/A 4.300±0.58 N/A N/A N/A 13.110±0.00 N/A N/A N/A N/A N/A 5.508±0.00 N/A N/A
ENSMUST00000151627 2.403±0.96 1.651±0.05 N/A 5.800±0.65 1.448±0.00 4.949±0.45 2.745±0.20 N/A 0.259±0.00 N/A N/A 2.664±0.72 1.201±0.00 1.844±0.49
ENSMUST00000183575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.400±0.00 1.509±0.00 N/A
ENSMUSG00000027335 ENSMUST00000103184 1.326±0.41 13.699±2.95 0.367±0.07 1.038±1.22 2.630±1.34 0.185±0.05 1.493±0.34 1.207±0.21 0.182±0.20 2.275±0.57 0.352±0.14 3.607±0.43 0.297±0.25 2.229±1.19
ENSMUSG00000087524 ENSMUST00000146049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.338±0.06 N/A N/A 44.406±20.82

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