C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermine oxidase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110186 Smox-008 ENSMUSG00000027333 10090 + 2:131491943-131525172 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000110186
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000110186 3.178±0.75 2.471±0.87 1.976±0.31 8.126±0.00 3.008±0.51 9.004±1.83 2.794±0.83 1.604±0.20 7.618±7.28 4.222±0.36 6.073±1.23 5.295±3.77 1.076±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068E CIL_00068E_0003 CGP 2:131298064-131525922
CIL_00037W CIL_00037W_0002 CGP 2:131491496-131562283

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006598 IEA polyamine catabolic process
GO:0046208 IDA:IEA spermine catabolic process
GO:0046592 IDA polyamine oxidase activity
GO:0052894 IEA norspermine:oxygen oxidoreductase activity
GO:0052895 IEA N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity
GO:0052901 IEA spermine:oxygen oxidoreductase (spermidine-forming) activity
GO:0055114 IDA:IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278795 SMOX-011 protein_coding Homo_sapiens 0 1218
ENST00000305958 SMOX-005 protein_coding Homo_sapiens 0 2054
ENST00000339123 SMOX-001 protein_coding Homo_sapiens 0 1218
ENST00000346595 SMOX-010 protein_coding Homo_sapiens 0 682
ENST00000379460 SMOX-008 protein_coding Homo_sapiens 0 2010
ENST00000457205 SMOX-004 protein_coding Homo_sapiens 0 1688
ENST00000484515 SMOX-009 processed_transcript Homo_sapiens 0 555
ENST00000486998 SMOX-002 processed_transcript Homo_sapiens 0 239
ENST00000494098 SMOX-007 processed_transcript Homo_sapiens 0 549
ENST00000621355 SMOX-201 protein_coding Homo_sapiens 0 2383

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