C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000381_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124786-ENSG00000181355 CGP 9606 6:8413068-10211608
GeneTranscriptPositionBiotype
ENSG00000124786 (SLC35B3)
solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3 		ENST00000379660 (SLC35B3-001) 8413068-8435483 protein_coding
ENSG00000216368 (RP3-486D24.1)
 ENST00000401715 (RP3-486D24.1-001) 10118452-10119253 processed_pseudogene
ENSG00000225775 (RP11-354I10.1)
 ENST00000431369 (RP11-354I10.1-001) 9124221-9161777 lincRNA
ENSG00000230939 (RP11-314C16.1)
 ENST00000429060 (RP11-314C16.1-001) 8784178-8785445 lincRNA
ENSG00000251164 (HULC)
hepatocellular carcinoma up-regulated long non-coding RNA 		ENST00000503668 (HULC-001) 8652137-8653846 lincRNA
ENSG00000276019 (HULC)
Highly up-regulated in liver cancer conserved region 		ENST00000612720 (HULC.1-201) 8653558-8653797 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_000381_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021432-ENSMUSG00000047094 CGP 10090 13:38932140-40288011
GeneTranscriptPositionBiotype
ENSMUSG00000021432 (Slc35b3)
solute carrier family 35, member B3 		ENSMUST00000021870 (Slc35b3-201) 38932140-38960875 protein_coding
ENSMUST00000167513 (Slc35b3-202) 38932140-38960537 protein_coding
ENSMUSG00000047094 (Ofcc1)
orofacial cleft 1 candidate 1 		ENSMUST00000054635 (Ofcc1-201) 40001882-40288011 protein_coding
ENSMUSG00000096932 (5033403F01Rik)
RIKEN cDNA 5033403F01 gene 		ENSMUST00000181376 (5033403F01Rik-201) 38960619-38966299 lincRNA
ENSMUSG00000097151 (Gm26514)
predicted gene, 26514 		ENSMUST00000181087 (Gm26514-201) 38945543-38951313 lincRNA

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000381_0001ENSG00000124786ENST00000379660ENSG00000216368ENST00000401715ENSG00000225775ENST00000431369ENSG00000230939ENST00000429060ENSG00000251164ENST00000503668ENSG00000276019ENST00000612720CIL_000381_0002ENSMUSG00000021432ENSMUST00000021870ENSMUST00000167513ENSMUSG00000047094ENSMUST00000054635ENSMUSG00000096932ENSMUST00000181376ENSMUSG00000097151ENSMUST00000181087
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000381_0001ENSG00000124786ENST00000379660ENSG00000216368ENST00000401715ENSG00000225775ENST00000431369ENSG00000230939ENST00000429060ENSG00000251164ENST00000503668ENSG00000276019ENST00000612720CIL_000381_0002ENSMUSG00000021432ENSMUST00000021870ENSMUST00000167513ENSMUSG00000047094ENSMUST00000054635ENSMUSG00000096932ENSMUST00000181376ENSMUSG00000097151ENSMUST00000181087
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124786 ENST00000379660 4.561±0.00 3.628±0.00 N/A 2.295±0.00 4.595±3.17 5.015±0.00 2.266±0.00 4.842±2.19 2.978±2.27 4.386±0.00 0.680±0.30 3.564±2.02 2.535±0.37 5.298±2.01
ENSG00000216368 ENST00000401715 N/A 0.066±0.00 N/A 0.024±0.00 0.046±0.00 N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A N/A
ENSG00000225775 ENST00000431369 N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A N/A 0.079±0.06
ENSG00000230939 ENST00000429060 0.488±0.00 0.267±0.00 N/A 0.795±0.46 0.207±0.00 0.193±0.00 0.227±0.00 0.505±0.00 N/A 0.692±0.10 N/A 0.482±0.23 0.236±0.11 0.696±0.45
ENSG00000251164 ENST00000503668 N/A N/A N/A N/A 0.337±0.00 N/A 0.192±0.00 61.716±0.00 9.856±0.00 0.073±0.00 N/A 0.104±0.03 N/A N/A
ENSG00000276019 ENST00000612720 N/A 0.093±0.00 N/A 0.090±0.00 N/A N/A N/A N/A 10.543±0.00 N/A N/A N/A 0.238±0.00 0.327±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021432 ENSMUST00000021870 N/A 1.812±0.00 N/A N/A N/A N/A N/A 1.159±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000167513 2.276±0.46 1.670±0.97 2.885±0.08 3.315±0.55 4.226±2.07 1.654±0.00 0.691±0.38 3.710±2.02 2.295±0.96 1.841±0.51 0.445±0.11 3.081±1.68 8.485±3.05 2.441±0.78
ENSMUSG00000047094 ENSMUST00000054635 0.023±0.01 N/A 0.025±0.00 0.022±0.01 0.074±0.04 N/A N/A 0.023±0.01 0.002±0.00 0.016±0.00 0.013±0.00 0.041±0.02 0.031±0.03 0.010±0.00
ENSMUSG00000096932 ENSMUST00000181376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.665±0.00
ENSMUSG00000097151 ENSMUST00000181087 0.605±0.21 0.667±0.31 0.323±0.04 0.390±0.24 0.822±0.31 0.965±0.39 0.353±0.06 0.381±0.09 0.341±0.16 1.102±0.38 0.028±0.01 1.430±0.97 0.240±0.19 0.312±0.12

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