C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00038Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040874-ENSDARG00000040884 CGP 7955 22:32736920-33050753
GeneTranscriptPositionBiotype
ENSDARG00000040874 (add3a)
adducin 3 (gamma) a 		ENSDART00000027803 (add3a-201) 32884932-32959354 protein_coding
ENSDART00000040538 (add3a-002) 32736951-32960144 protein_coding
ENSDART00000049075 (add3a-001) 32873714-32960144 protein_coding
ENSDART00000134834 (add3a-005) 32736925-32802829 processed_transcript
ENSDART00000140015 (add3a-006) 32736936-32927613 protein_coding
ENSDART00000141247 (add3a-003) 32736923-32885150 protein_coding
ENSDART00000142857 (add3a-004) 32736920-32906991 protein_coding
ENSDARG00000040884 (mxi1)
max interacting protein 		ENSDART00000059923 (mxi1-002) 33025611-33050753 protein_coding
ENSDART00000104751 (mxi1-001) 33020249-33050753 protein_coding
ENSDARG00000081057 (BX088706.1)
 ENSDART00000116586 (BX088706.1-201) 32954021-32954113 miRNA
ENSDARG00000085396 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000120796 (5S_rRNA.1164-201) 32840465-32840589 rRNA
ENSDARG00000094252 (si:dkeyp-79f12.7)
si:dkeyp-79f12.7 		ENSDART00000133482 (si:dkeyp-79f12.7-001) 33021089-33023640 sense_intronic

Danio rerio Ensembl (Zv9)

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CIL_00038Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148700-ENSG00000119950 CGP 9606 10:109996368-110287365
GeneTranscriptPositionBiotype
ENSG00000119950 (MXI1)
MAX interactor 1, dimerization protein 		ENST00000239007 (MXI1-006) 110225993-110286506 protein_coding
ENST00000332674 (MXI1-004) 110207605-110287365 protein_coding
ENST00000361248 (MXI1-005) 110210231-110286506 protein_coding
ENST00000369612 (MXI1-011) 110227679-110285048 protein_coding
ENST00000393134 (MXI1-009) 110226084-110285092 protein_coding
ENST00000442296 (MXI1-010) 110227541-110280024 protein_coding
ENST00000453116 (MXI1-008) 110207684-110280069 protein_coding
ENST00000460667 (MXI1-003) 110226035-110284890 processed_transcript
ENST00000484030 (MXI1-012) 110227366-110285114 processed_transcript
ENST00000485566 (MXI1-007) 110227643-110286506 processed_transcript
ENSG00000148700 (ADD3)
adducin 3 (gamma) 		ENST00000277900 (ADD3-002) 110007964-110135565 protein_coding
ENST00000356080 (ADD3-001) 110007962-110134211 protein_coding
ENST00000360162 (ADD3-003) 110005804-110134330 protein_coding
ENST00000459738 (ADD3-006) 110008209-110100704 processed_transcript
ENST00000468251 (ADD3-007) 109996368-110118608 processed_transcript
ENST00000468345 (ADD3-010) 110077005-110117395 processed_transcript
ENST00000472568 (ADD3-018) 110123837-110130389 processed_transcript
ENST00000473669 (ADD3-011) 110077005-110112906 processed_transcript
ENST00000475954 (ADD3-015) 110008252-110117379 processed_transcript
ENST00000479805 (ADD3-021) 110125902-110132727 processed_transcript
ENST00000484622 (ADD3-005) 110008208-110117359 processed_transcript
ENST00000486014 (ADD3-012) 110079239-110124143 processed_transcript
ENST00000487085 (ADD3-013) 110008208-110112899 processed_transcript
ENST00000488104 (ADD3-017) 110119315-110119690 processed_transcript
ENST00000488799 (ADD3-020) 110125755-110133348 processed_transcript
ENST00000488837 (ADD3-022) 110121855-110124168 processed_transcript
ENST00000492162 (ADD3-019) 110124240-110130393 processed_transcript
ENST00000495661 (ADD3-009) 110008231-110112894 processed_transcript
ENST00000496517 (ADD3-008) 110016435-110117402 processed_transcript
ENST00000497125 (ADD3-014) 110008231-110118630 processed_transcript
ENST00000611329 (ADD3-201) 110008205-110133869 protein_coding
ENSG00000214067 (RP11-549L6.2)
 ENST00000397433 (RP11-549L6.2-001) 110257064-110257843 processed_pseudogene
ENSG00000226734 (SNRPGP12)
small nuclear ribonucleoprotein polypeptide G pseudogene 12 		ENST00000449481 (SNRPGP12-001) 110139214-110139426 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00038Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025026-ENSMUSG00000025025 CGP 10090 19:53140445-53375810
GeneTranscriptPositionBiotype
ENSMUSG00000025025 (Mxi1)
Max interacting protein 1 		ENSMUST00000003870 (Mxi1-201) 53310506-53375810 protein_coding
ENSMUST00000025998 (Mxi1-202) 53329413-53375810 protein_coding
ENSMUST00000111737 (Mxi1-203) 53330446-53375810 protein_coding
ENSMUSG00000025026 (Add3)
adducin 3 (gamma) 		ENSMUST00000025999 (Add3-201) 53143997-53247399 protein_coding
ENSMUST00000050096 (Add3-202) 53142756-53247399 protein_coding
ENSMUST00000111741 (Add3-203) 53140445-53247399 protein_coding
ENSMUSG00000088855 (Gm24724)
predicted gene, 24724 		ENSMUST00000158230 (Gm24724-201) 53159757-53159863 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Y_0001ENSDARG00000040874ENSDART00000027803ENSDART00000040538ENSDART00000049075ENSDART00000134834ENSDART00000140015ENSDART00000141247ENSDART00000142857ENSDARG00000040884ENSDART00000059923ENSDART00000104751ENSDARG00000081057ENSDART00000116586ENSDARG00000085396ENSDART00000120796ENSDARG00000094252ENSDART00000133482CIL_00038Y_0002ENSG00000119950ENST00000239007ENST00000332674ENST00000361248ENST00000369612ENST00000393134ENST00000442296ENST00000453116ENST00000460667ENST00000484030ENST00000485566ENSG00000148700ENST00000277900ENST00000356080ENST00000360162ENST00000459738ENST00000468251ENST00000468345ENST00000472568ENST00000473669ENST00000475954ENST00000479805ENST00000484622ENST00000486014ENST00000487085ENST00000488104ENST00000488799ENST00000488837ENST00000492162ENST00000495661ENST00000496517ENST00000497125ENST00000611329ENSG00000214067ENST00000397433ENSG00000226734ENST00000449481CIL_00038Y_0003ENSMUSG00000025025ENSMUST00000003870ENSMUST00000025998ENSMUST00000111737ENSMUSG00000025026ENSMUST00000025999ENSMUST00000050096ENSMUST00000111741ENSMUSG00000088855ENSMUST00000158230
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00038Y_0001ENSDARG00000040874ENSDART00000027803ENSDART00000040538ENSDART00000049075ENSDARG00000040884ENSDART00000059923ENSDART00000104751ENSDARG00000081057ENSDART00000116586ENSDARG00000085396ENSDART00000120796ENSDARG00000094252ENSDART00000133482CIL_00038Y_0002ENSG00000119950ENST00000239007ENST00000332674ENST00000361248ENST00000369612ENST00000442296ENST00000453116ENST00000460667ENST00000485566ENSG00000148700ENST00000277900ENST00000356080ENST00000360162ENST00000472568ENST00000488837ENST00000611329ENSG00000214067ENST00000397433ENSG00000226734ENST00000449481CIL_00038Y_0003ENSMUSG00000025025ENSMUST00000003870ENSMUST00000025998ENSMUST00000111737ENSMUSG00000025026ENSMUST00000025999ENSMUST00000050096ENSMUST00000111741ENSMUSG00000088855ENSMUST00000158230
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040874 ENSDART00000027803 N/A N/A N/A 3.776±0.00 N/A N/A 16.096±0.00 N/A 0.555±0.00 N/A 5.521±0.00 N/A N/A N/A
ENSDART00000040538 N/A N/A N/A 4.596±0.00 N/A N/A N/A 6.726±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000049075 N/A N/A N/A 17.144±0.00 N/A N/A 57.889±0.00 15.579±0.00 0.201±0.00 N/A N/A N/A N/A N/A
ENSDART00000134834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000040884 ENSDART00000059923 N/A N/A N/A 21.801±8.37 N/A N/A 11.344±9.22 4.689±2.83 0.420±0.00 N/A 27.762±0.00 N/A N/A N/A
ENSDART00000104751 N/A N/A N/A 26.958±8.72 N/A N/A 19.078±15.63 2.817±1.12 0.687±0.00 N/A 13.206±0.00 N/A N/A N/A
ENSDARG00000081057 ENSDART00000116586 N/A N/A N/A N/A N/A N/A 2.472±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000085396 ENSDART00000120796 N/A N/A N/A 61.552±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000094252 ENSDART00000133482 N/A N/A N/A 1.217±0.13 N/A N/A 0.785±0.77 0.245±0.24 0.058±0.00 N/A 0.396±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119950 ENST00000239007 8.451±0.00 2.571±0.00 1.912±0.00 15.099±12.34 6.521±4.36 17.415±15.21 8.052±6.07 7.008±0.00 1.930±0.24 9.227±5.87 8.494±6.51 8.435±7.10 3.511±1.69 7.608±0.00
ENST00000332674 1.474±0.00 1.178±0.00 N/A 5.119±0.00 2.492±0.00 3.387±1.76 1.708±1.08 N/A N/A N/A N/A 3.515±0.44 1.330±0.15 2.246±0.16
ENST00000361248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.764±0.00 N/A 2.847±0.00
ENST00000369612 N/A N/A 4.640±0.00 N/A 3.229±0.00 2.856±0.00 4.421±0.00 5.282±0.00 5.551±0.00 3.340±0.00 N/A 3.781±0.00 N/A N/A
ENST00000393134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442296 N/A N/A N/A N/A N/A 9.835±0.00 N/A 7.539±0.00 N/A N/A 2.468±0.00 N/A N/A N/A
ENST00000453116 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.534±0.00
ENST00000460667 N/A N/A N/A N/A N/A N/A N/A 3.506±0.00 N/A N/A 2.021±0.00 12.125±0.00 10.818±0.00 15.834±0.00
ENST00000484030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.094±0.00 N/A 3.449±0.00
ENSG00000148700 ENST00000277900 12.890±0.00 7.005±0.00 5.003±0.00 22.548±6.26 7.825±1.72 11.194±7.36 10.847±5.00 8.802±6.55 3.144±1.23 8.461±0.53 2.064±0.00 12.928±2.91 9.575±1.54 16.042±1.92
ENST00000356080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.821±0.00 N/A N/A
ENST00000360162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.889±0.00 N/A N/A N/A
ENST00000459738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468251 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.342±0.00 N/A N/A N/A
ENST00000473669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.678±0.00 49.478±0.00
ENST00000492162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611329 N/A N/A 8.884±0.00 14.610±3.67 6.743±0.00 13.900±0.00 8.387±0.00 4.259±0.00 11.802±0.00 4.093±0.00 0.504±0.00 9.511±2.03 5.600±0.00 8.271±0.00
ENSG00000214067 ENST00000397433 0.024±0.00 N/A N/A 0.213±0.00 0.092±0.00 0.679±0.00 0.588±0.50 N/A 0.118±0.00 N/A N/A 1.256±1.58 N/A 0.042±0.00
ENSG00000226734 ENST00000449481 N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025025 ENSMUST00000003870 1.430±0.16 2.520±0.24 2.127±0.98 3.499±2.17 1.668±0.82 8.970±1.73 1.183±0.22 1.504±0.00 1.246±0.54 1.292±0.35 1.213±0.38 3.744±1.19 2.191±1.69 2.212±0.29
ENSMUST00000025998 3.236±0.78 6.067±0.72 N/A 3.853±2.70 4.278±1.10 4.445±1.42 3.027±0.68 9.966±0.81 3.480±1.85 4.700±0.45 2.830±2.04 5.587±1.84 2.838±2.31 10.919±2.24
ENSMUST00000111737 N/A N/A N/A N/A 3.147±0.00 N/A N/A N/A N/A N/A N/A 3.593±1.77 0.873±0.00 N/A
ENSMUSG00000025026 ENSMUST00000025999 N/A N/A N/A N/A 6.810±0.00 N/A N/A 5.317±0.96 1.153±0.43 N/A N/A 4.303±2.41 N/A 3.963±1.69
ENSMUST00000050096 10.078±5.67 4.913±0.20 24.957±0.25 3.876±0.23 9.548±3.72 7.765±2.85 8.148±1.10 6.736±1.07 3.284±2.26 21.761±0.86 2.621±2.12 8.700±2.48 3.294±1.28 5.026±1.85
ENSMUST00000111741 12.072±5.19 N/A 17.856±0.22 4.023±0.69 19.593±2.55 10.455±2.05 4.474±0.95 17.691±1.92 3.570±2.63 14.489±1.05 N/A 11.634±4.87 1.839±1.25 4.969±0.79
ENSMUSG00000088855 ENSMUST00000158230 N/A N/A N/A 17.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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