C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: adducin 3 (gamma)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360162 ADD3-003 ENSG00000148700 9606 + 10:110005804-110134330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000360162
Transcript ID Muscle
ENST00000360162 0.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FE CIL_0006FE_0001 CGP 10:109864766-110135565
CIL_00038Y CIL_00038Y_0002 CGP 10:109996368-110287365

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005516 IEA calmodulin binding
GO:0005886 IEA plasma membrane
GO:0016020 TAS membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050096 Add3-202 protein_coding Mus_musculus 0 2420
ENSMUST00000111741 Add3-203 protein_coding Mus_musculus 0 1938
ENSMUST00000025999 Add3-201 protein_coding Mus_musculus 0 1936
ENSMUST00000120746 Ncald-002 protein_coding Mus_musculus 0.000001 60
ENSMUST00000119730 Ncald-003 protein_coding Mus_musculus 0.000001 60
ENSMUST00000132423 Ncald-011 processed_transcript Mus_musculus 0.0000003 60
ENSDART00000090292 ctnnd2b-001 protein_coding Danio_rerio 0.0004 53

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