C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039241-ENSDARG00000003326 CGP 7955 6:22912210-23139437
GeneTranscriptPositionBiotype
ENSDARG00000003326 (cacng5a)
calcium channel, voltage-dependent, gamma subunit 5a 		ENSDART00000017774 (cacng5a-201) 23113138-23139436 protein_coding
ENSDART00000151099 (cacng5a-001) 23079383-23139437 protein_coding
ENSDARG00000039241 (prkca)
protein kinase C, alpha 		ENSDART00000086619 (prkca-001) 22912210-23074768 protein_coding
CIL_0003AL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000087422-ENSDARG00000039240 CGP 7955 3:56722242-56805492
GeneTranscriptPositionBiotype
ENSDARG00000039240 (cacng5b)
calcium channel, voltage-dependent, gamma subunit 5b 		ENSDART00000057327 (cacng5b-201) 56789338-56805073 protein_coding
ENSDART00000154367 (cacng5b-001) 56777869-56805492 protein_coding
ENSDARG00000087422 (PRKCA (3 of 3))
protein kinase C, alpha 		ENSDART00000130439 (PRKCA (3 of 3)-001) 56722242-56764470 protein_coding
CIL_0003AL_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154229-ENSG00000075429 CGP 9606 17:66302636-66885486
GeneTranscriptPositionBiotype
ENSG00000075429 (CACNG5)
calcium channel, voltage-dependent, gamma subunit 5 		ENST00000307139 (CACNG5-201) 66877273-66885278 protein_coding
ENST00000533854 (CACNG5-001) 66835117-66885486 protein_coding
ENSG00000154229 (PRKCA)
protein kinase C, alpha 		ENST00000284384 (PRKCA-003) 66302860-66775127 nonsense_mediated_decay
ENST00000413366 (PRKCA-002) 66302826-66810743 protein_coding
ENST00000578063 (PRKCA-001) 66302636-66703864 nonsense_mediated_decay
ENST00000583361 (PRKCA-005) 66302808-66340060 processed_transcript
ENST00000583775 (PRKCA-004) 66302957-66306348 retained_intron
ENSG00000229330 (AC006947.1)
 ENST00000457168 (AC006947.1-001) 66676372-66677404 sense_intronic
ENSG00000244044 (RN7SL735P)
RNA, 7SL, cytoplasmic 735, pseudogene 		ENST00000471015 (RN7SL735P-201) 66364029-66364320 misc_RNA
ENSG00000251698 (RNA5SP445)
RNA, 5S ribosomal pseudogene 445 		ENST00000515889 (RNA5SP445-201) 66639269-66639383 rRNA
ENSG00000252685 (RNU6-928P)
RNA, U6 small nuclear 928, pseudogene 		ENST00000516876 (RNU6-928P-201) 66638271-66638374 snRNA
ENSG00000264630 (RP11-4F22.2)
PRKCA antisense RNA 1 		ENST00000583421 (RP11-4F22.2-002) 66415568-66416791 antisense
ENST00000584614 (RP11-4F22.2-003) 66403638-66414973 antisense
ENST00000584715 (RP11-4F22.2-001) 66398069-66416854 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AL_0001ENSDARG00000003326ENSDART00000017774ENSDART00000151099ENSDARG00000039241ENSDART00000086619CIL_0003AL_0002ENSDARG00000039240ENSDART00000057327ENSDART00000154367ENSDARG00000087422ENSDART00000130439CIL_0003AL_0003ENSG00000075429ENST00000307139ENST00000533854ENSG00000154229ENST00000284384ENST00000413366ENST00000578063ENST00000583361ENST00000583775ENSG00000229330ENST00000457168ENSG00000244044ENST00000471015ENSG00000251698ENST00000515889ENSG00000252685ENST00000516876ENSG00000264630ENST00000583421ENST00000584614ENST00000584715
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AL_0001ENSDARG00000003326ENSDART00000017774ENSDART00000151099ENSDARG00000039241ENSDART00000086619CIL_0003AL_0002ENSDARG00000039240ENSDART00000057327ENSDART00000154367ENSDARG00000087422ENSDART00000130439CIL_0003AL_0003ENSG00000075429ENST00000307139ENST00000533854ENSG00000154229ENST00000284384ENST00000413366ENST00000578063ENSG00000229330ENST00000457168ENSG00000244044ENST00000471015ENSG00000251698ENST00000515889ENSG00000252685ENST00000516876ENSG00000264630ENST00000583421ENST00000584614ENST00000584715
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003326 ENSDART00000017774 N/A N/A N/A 1.353±0.63 N/A N/A 0.089±0.00 0.096±0.00 0.064±0.00 N/A N/A N/A N/A N/A
ENSDART00000151099 N/A N/A N/A 3.034±0.16 N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A N/A
ENSDARG00000039241 ENSDART00000086619 N/A N/A N/A 5.583±0.00 N/A N/A 1.781±0.13 0.828±0.92 0.022±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039240 ENSDART00000057327 N/A N/A N/A 2.972±0.00 N/A N/A 0.095±0.00 0.345±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000154367 N/A N/A N/A 7.056±0.00 N/A N/A 0.031±0.00 0.361±0.17 N/A N/A 0.414±0.00 N/A N/A N/A
ENSDARG00000087422 ENSDART00000130439 N/A N/A N/A 6.155±2.13 N/A N/A 2.618±1.47 1.766±1.29 N/A N/A 0.107±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075429 ENST00000307139 N/A N/A N/A 0.199±0.14 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00
ENST00000533854 N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000154229 ENST00000284384 N/A N/A N/A N/A 0.904±0.00 N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A
ENST00000413366 3.515±0.00 2.426±0.00 3.009±0.00 16.993±9.45 1.328±0.28 3.841±2.55 1.060±0.98 4.378±2.33 2.941±0.71 2.136±0.48 2.405±2.11 3.334±1.97 1.775±0.52 2.820±1.97
ENST00000578063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.941±0.00
ENST00000583361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229330 ENST00000457168 0.125±0.00 0.221±0.00 N/A 0.206±0.00 0.142±0.00 0.432±0.00 0.085±0.00 N/A N/A 0.264±0.00 N/A N/A N/A 0.066±0.03
ENSG00000244044 ENST00000471015 0.120±0.00 0.325±0.00 0.681±0.00 0.072±0.00 0.069±0.00 0.176±0.05 N/A 0.067±0.00 N/A N/A 0.057±0.00 N/A N/A N/A
ENSG00000251698 ENST00000515889 0.242±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252685 ENST00000516876 N/A N/A N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000264630 ENST00000583421 0.024±0.00 0.074±0.00 N/A N/A 0.108±0.00 N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A 0.380±0.00
ENST00000584614 N/A 0.099±0.00 N/A 0.228±0.16 1.251±0.00 0.044±0.00 0.156±0.00 N/A N/A 0.802±0.00 N/A 0.022±0.00 N/A 0.889±0.00
ENST00000584715 0.007±0.00 0.052±0.00 0.316±0.00 0.006±0.00 0.299±0.25 0.011±0.00 0.026±0.00 N/A 0.026±0.00 0.408±0.00 N/A 0.027±0.01 N/A 0.356±0.00

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