C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calcium channel, voltage-dependent, gamma subunit 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307139 CACNG5-201 ENSG00000075429 9606 + 17:66877273-66885278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENST00000307139
Transcript ID Brain Testis
ENST00000307139 0.199±0.14 0.169±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AL CIL_0003AL_0003 CGP 17:66302636-66885486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 TAS voltage-gated calcium channel activity
GO:0006810 TAS transport
GO:0014069 ISS postsynaptic density
GO:0015075 TAS ion transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0032281 ISS alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045211 IEA postsynaptic membrane
GO:0070588 IEA calcium ion transmembrane transport
GO:2000311 ISS regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106742 Cacng5-002 protein_coding Mus_musculus 0 1070
ENSMUST00000039071 Cacng5-001 protein_coding Mus_musculus 0 1070
ENSDART00000151099 cacng5a-001 protein_coding Danio_rerio 0 414
ENSDART00000017774 cacng5a-201 protein_coding Danio_rerio 0 412

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