C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003DE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125861-ENSG00000149451 CGP 9606 20:3659292-3682246
GeneTranscriptPositionBiotype
ENSG00000125861 (GFRA4)
GDNF family receptor alpha 4 		ENST00000290417 (GFRA4-001) 3659292-3663399 protein_coding
ENST00000319242 (GFRA4-002) 3659909-3663399 protein_coding
ENST00000477160 (GFRA4-003) 3660625-3663399 nonsense_mediated_decay
ENSG00000149451 (ADAM33)
ADAM metallopeptidase domain 33 		ENST00000350009 (ADAM33-201) 3667974-3682131 protein_coding
ENST00000356518 (ADAM33-001) 3667970-3682246 protein_coding
ENST00000379861 (ADAM33-005) 3667970-3682246 protein_coding
ENST00000466620 (ADAM33-002) 3667965-3673747 processed_transcript
ENST00000483362 (ADAM33-004) 3667970-3670625 processed_transcript
ENST00000617732 (ADAM33-202) 3668582-3682051 protein_coding
ENST00000619289 (ADAM33-203) 3667974-3682131 protein_coding
CIL_0003DE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027316-ENSMUSG00000027318 CGP 10090 2:131039632-131063814
GeneTranscriptPositionBiotype
ENSMUSG00000027316 (Gfra4)
glial cell line derived neurotrophic factor family receptor alpha 4 		ENSMUST00000028787 (Gfra4-004) 131040176-131042682 protein_coding
ENSMUST00000066958 (Gfra4-002) 131040208-131043088 protein_coding
ENSMUST00000110234 (Gfra4-006) 131041232-131042682 protein_coding
ENSMUST00000110235 (Gfra4-003) 131041232-131043088 protein_coding
ENSMUST00000110239 (Gfra4-005) 131040208-131042682 protein_coding
ENSMUST00000110240 (Gfra4-001) 131039632-131043088 protein_coding
ENSMUST00000136569 (Gfra4-007) 131039640-131041511 retained_intron
ENSMUST00000156509 (Gfra4-008) 131039639-131041457 retained_intron
ENSMUSG00000027318 (Adam33)
a disintegrin and metallopeptidase domain 33 		ENSMUST00000052104 (Adam33-002) 131051109-131063814 protein_coding
ENSMUST00000110232 (Adam33-001) 131050817-131063814 protein_coding
ENSMUST00000124481 (Adam33-009) 131062049-131063543 retained_intron
ENSMUST00000127343 (Adam33-013) 131053221-131054059 processed_transcript
ENSMUST00000128828 (Adam33-008) 131050591-131054036 retained_intron
ENSMUST00000132071 (Adam33-010) 131053522-131054529 retained_intron
ENSMUST00000132436 (Adam33-003) 131050825-131063569 retained_intron
ENSMUST00000134742 (Adam33-006) 131051110-131056481 retained_intron
ENSMUST00000135149 (Adam33-007) 131050863-131056367 protein_coding
ENSMUST00000147333 (Adam33-005) 131057530-131063513 protein_coding
ENSMUST00000149625 (Adam33-012) 131053090-131054516 processed_transcript
ENSMUST00000183552 (Adam33-004) 131050875-131063545 nonsense_mediated_decay
ENSMUST00000184921 (Adam33-011) 131053042-131054526 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DE_0001ENSG00000125861ENST00000290417ENST00000319242ENST00000477160ENSG00000149451ENST00000350009ENST00000356518ENST00000379861ENST00000466620ENST00000483362ENST00000617732ENST00000619289CIL_0003DE_0002ENSMUSG00000027316ENSMUST00000028787ENSMUST00000066958ENSMUST00000110234ENSMUST00000110235ENSMUST00000110239ENSMUST00000110240ENSMUST00000136569ENSMUST00000156509ENSMUSG00000027318ENSMUST00000052104ENSMUST00000110232ENSMUST00000124481ENSMUST00000127343ENSMUST00000128828ENSMUST00000132071ENSMUST00000132436ENSMUST00000134742ENSMUST00000135149ENSMUST00000147333ENSMUST00000149625ENSMUST00000183552ENSMUST00000184921
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003DE_0001ENSG00000125861ENST00000290417ENSG00000149451ENST00000350009ENST00000356518ENST00000379861ENST00000466620ENST00000483362ENST00000617732ENST00000619289CIL_0003DE_0002ENSMUSG00000027316ENSMUST00000028787ENSMUST00000110234ENSMUST00000110235ENSMUST00000110239ENSMUST00000136569ENSMUST00000156509ENSMUSG00000027318ENSMUST00000052104ENSMUST00000110232ENSMUST00000128828ENSMUST00000132436ENSMUST00000134742ENSMUST00000135149ENSMUST00000147333ENSMUST00000183552
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125861 ENST00000290417 N/A N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A 0.502±0.00
ENST00000319242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477160 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000149451 ENST00000350009 1.699±0.00 N/A N/A N/A N/A N/A 0.055±0.00 N/A 0.194±0.00 0.512±0.00 0.853±0.00 0.669±0.00 1.391±0.00 1.979±0.00
ENST00000356518 2.443±0.00 N/A N/A N/A N/A N/A 0.989±0.00 N/A N/A N/A N/A 2.686±0.00 2.061±0.37 N/A
ENST00000379861 N/A 0.749±0.00 N/A N/A 4.192±0.00 1.999±0.00 N/A N/A N/A N/A N/A 5.575±0.00 0.628±0.06 1.343±0.00
ENST00000466620 N/A 0.621±0.00 0.161±0.00 0.122±0.04 3.223±0.00 N/A N/A N/A N/A N/A N/A 2.846±2.12 N/A 3.061±0.00
ENST00000483362 N/A N/A N/A N/A N/A N/A 0.053±0.00 0.187±0.00 N/A N/A N/A N/A N/A 0.670±0.00
ENST00000617732 N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A 0.903±0.00 N/A 0.463±0.00 N/A N/A
ENST00000619289 N/A 1.003±0.00 N/A 0.269±0.00 0.465±0.00 N/A N/A N/A N/A 0.357±0.00 N/A 2.839±0.96 1.289±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027316 ENSMUST00000028787 N/A 1.538±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000066958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110234 N/A 4.273±2.04 N/A N/A N/A 2.804±0.94 N/A N/A N/A N/A N/A 6.205±0.54 N/A N/A
ENSMUST00000110235 N/A 7.873±0.23 N/A N/A 4.357±0.00 2.879±0.58 N/A N/A N/A N/A N/A 8.699±0.00 N/A N/A
ENSMUST00000110239 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A
ENSMUST00000110240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136569 2.801±1.77 2.910±0.66 17.719±3.55 7.808±1.88 2.037±0.39 2.674±0.62 2.129±0.41 0.819±0.24 0.106±0.05 0.830±0.02 0.245±0.08 3.683±1.62 0.534±0.33 2.122±1.18
ENSMUST00000156509 6.475±3.21 6.735±1.57 43.991±1.22 13.862±6.89 5.246±0.88 7.186±1.29 5.158±0.69 1.922±0.53 0.149±0.10 1.831±0.31 0.504±0.20 8.602±4.23 1.286±0.59 21.761±9.97
ENSMUSG00000027318 ENSMUST00000052104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.649±0.00 N/A 0.415±0.00 N/A
ENSMUST00000110232 1.679±0.00 N/A N/A N/A N/A N/A N/A N/A 0.140±0.03 1.886±0.00 0.444±0.09 N/A N/A 0.297±0.00
ENSMUST00000124481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128828 N/A N/A N/A N/A 5.098±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132436 3.307±0.92 1.130±0.29 41.241±6.08 0.232±0.01 5.561±1.29 4.584±0.74 0.707±0.19 0.390±0.04 0.180±0.10 3.741±0.62 0.710±0.15 4.214±1.93 0.514±0.47 0.467±0.21
ENSMUST00000134742 2.737±0.56 1.748±0.26 48.720±0.00 0.441±0.00 6.072±0.74 6.737±1.57 0.775±0.00 0.414±0.13 0.225±0.06 3.591±0.99 0.663±0.11 6.922±2.05 0.605±0.54 0.358±0.00
ENSMUST00000135149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.593±0.00 4.346±0.00 0.368±0.26 N/A
ENSMUST00000147333 N/A N/A N/A 1.704±0.00 8.193±0.00 N/A N/A N/A N/A N/A 0.717±0.01 4.152±0.67 0.367±0.27 N/A
ENSMUST00000149625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183552 2.908±0.70 1.207±0.58 26.438±4.74 0.335±0.00 5.783±0.63 6.583±1.21 1.231±0.49 0.362±0.10 0.093±0.03 2.943±0.52 0.586±0.00 3.792±0.83 0.512±0.02 0.290±0.02
ENSMUST00000184921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading