C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144649-ENSG00000144647 CGP 9606 3:42979267-43106076
GeneTranscriptPositionBiotype
ENSG00000144647 (POMGNT2)
protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) 		ENST00000344697 (POMGNT2-001) 43079234-43106076 protein_coding
ENST00000441964 (POMGNT2-002) 43079232-43105939 protein_coding
ENSG00000227245 (RP11-136C24.2)
 ENST00000457115 (RP11-136C24.2-001) 43087479-43088068 lincRNA
ENSG00000232375 (RP11-136C24.1)
 ENST00000417304 (RP11-136C24.1-001) 43037121-43037451 unprocessed_pseudogene
ENSG00000273291 (RP11-136C24.3)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477043} 		ENST00000418093 (RP11-136C24.3-003) 42936342-43032547 processed_transcript
ENST00000443313 (RP11-136C24.3-002) 42936392-43055871 nonsense_mediated_decay
ENST00000446977 (RP11-136C24.3-004) 42936859-43032292 protein_coding
ENST00000451200 (RP11-136C24.3-001) 42809446-43032335 processed_transcript
CIL_0003EZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038233-ENSMUSG00000066235 CGP 10090 9:121950988-121996026
GeneTranscriptPositionBiotype
ENSMUSG00000038233 (Fam198a)
family with sequence similarity 198, member A 		ENSMUST00000043011 (Fam198a-201) 121950988-121980208 protein_coding
ENSMUSG00000066235 (Pomgnt2)
protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2 		ENSMUST00000084743 (Pomgnt2-201) 121981606-121996026 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EZ_0001ENSG00000144647ENST00000344697ENST00000441964ENSG00000227245ENST00000457115ENSG00000232375ENST00000417304ENSG00000273291ENST00000418093ENST00000443313ENST00000446977ENST00000451200CIL_0003EZ_0002ENSMUSG00000038233ENSMUST00000043011ENSMUSG00000066235ENSMUST00000084743
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EZ_0001ENSG00000144647ENST00000344697ENST00000441964ENSG00000227245ENST00000457115ENSG00000232375ENST00000417304ENSG00000273291ENST00000418093CIL_0003EZ_0002ENSMUSG00000038233ENSMUST00000043011ENSMUSG00000066235ENSMUST00000084743
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144647 ENST00000344697 3.851±0.00 6.640±0.00 1.362±0.00 8.462±4.32 3.385±2.53 3.923±2.86 4.511±0.00 5.134±3.64 2.354±0.00 3.377±2.80 5.651±2.44 12.536±14.80 5.028±1.88 15.682±0.00
ENST00000441964 N/A N/A N/A 2.834±0.16 0.638±0.00 N/A 2.237±0.80 N/A N/A N/A 3.392±0.00 0.658±0.00 N/A 0.868±0.00
ENSG00000227245 ENST00000457115 0.110±0.00 N/A 0.143±0.00 0.667±0.34 0.144±0.00 N/A N/A N/A N/A N/A 0.223±0.00 N/A N/A 0.619±0.00
ENSG00000232375 ENST00000417304 N/A 0.053±0.00 N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A 1.226±0.00 0.192±0.00 N/A
ENSG00000273291 ENST00000418093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.159±0.00
ENST00000443313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038233 ENSMUST00000043011 0.702±0.43 0.489±0.15 2.581±0.30 0.416±0.05 0.862±0.43 0.512±0.19 0.346±0.18 0.155±0.08 0.461±0.51 1.396±0.49 0.158±0.05 1.398±1.18 0.025±0.02 0.224±0.11
ENSMUSG00000066235 ENSMUST00000084743 8.280±0.74 13.651±2.28 5.239±1.13 6.470±1.03 5.625±1.92 11.620±1.63 6.711±0.64 6.399±1.50 1.291±0.56 6.220±1.03 4.011±1.61 14.093±4.57 2.646±0.87 1.790±0.62

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