C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 198, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043011 Fam198a-201 ENSMUSG00000038233 10090 + 9:121950988-121980208 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043011 0.702±0.43 0.489±0.15 2.581±0.30 0.416±0.05 0.862±0.43 0.512±0.19 0.346±0.18 0.155±0.08 0.461±0.51 1.396±0.49 0.158±0.05 1.398±1.18 0.025±0.02 0.224±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EZ CIL_0003EZ_0002 CGP 9:121950988-121996026

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000273146 FAM198A-001 nonsense_mediated_decay Homo_sapiens 0 942
ENST00000430121 FAM198A-003 protein_coding Homo_sapiens 0 942
ENST00000434206 FAM198A-005 retained_intron Homo_sapiens 0 603
ENST00000443313 RP11-136C24.3-002 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000488863 FAM198A-004 protein_coding Homo_sapiens 0 505
ENST00000492161 FAM198A-002 retained_intron Homo_sapiens 0 189

Loading