C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003G4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119703-ENSG00000119638 CGP 9606 14:75064170-75127344
GeneTranscriptPositionBiotype
ENSG00000119638 (NEK9)
NIMA-related kinase 9 		ENST00000238616 (NEK9-001) 75079353-75127080 protein_coding
ENST00000553823 (NEK9-005) 75118887-75127344 protein_coding
ENST00000553945 (NEK9-011) 75120516-75127053 nonsense_mediated_decay
ENST00000554258 (NEK9-007) 75117213-75126933 nonsense_mediated_decay
ENST00000555405 (NEK9-004) 75082121-75091685 retained_intron
ENST00000555537 (NEK9-009) 75096670-75101065 retained_intron
ENST00000555763 (NEK9-010) 75084087-75085095 processed_transcript
ENST00000555961 (NEK9-008) 75118869-75120730 retained_intron
ENST00000556170 (NEK9-002) 75086429-75127045 retained_intron
ENST00000557026 (NEK9-003) 75082121-75117245 retained_intron
ENST00000557673 (NEK9-006) 75117217-75127040 protein_coding
ENSG00000119640 (ACYP1)
acylphosphatase 1, erythrocyte (common) type 		ENST00000238618 (ACYP1-001) 75053221-75064049 protein_coding
ENST00000357971 (ACYP1-005) 75053243-75064015 protein_coding
ENST00000553302 (ACYP1-004) 75063023-75064020 protein_coding
ENST00000555135 (ACYP1-006) 75059848-75064007 protein_coding
ENST00000555463 (ACYP1-002) 75053237-75069483 protein_coding
ENST00000555694 (ACYP1-003) 75053243-75064027 protein_coding
ENSG00000119703 (ZC2HC1C)
zinc finger, C2HC-type containing 1C 		ENST00000238686 (ZC2HC1C-008) 75069577-75078423 protein_coding
ENST00000439583 (ZC2HC1C-002) 75069641-75078089 protein_coding
ENST00000524913 (ZC2HC1C-001) 75069280-75079987 protein_coding
ENST00000525046 (ZC2HC1C-005) 75069677-75070849 protein_coding
ENST00000526130 (ZC2HC1C-003) 75069673-75071087 protein_coding
ENST00000526748 (ZC2HC1C-004) 75069674-75078091 processed_transcript
ENST00000532198 (ZC2HC1C-007) 75070974-75077819 protein_coding
ENST00000534151 (ZC2HC1C-006) 75064170-75070853 protein_coding
ENST00000554763 (ZC2HC1C-009) 75069641-75071056 protein_coding
ENSG00000258978 (HIF1AP1)
hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) pseudogene 1 		ENST00000553642 (HIF1AP1-001) 75116426-75116600 processed_pseudogene
CIL_0003G4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045064-ENSMUSG00000034290 CGP 10090 12:85288591-85339362
GeneTranscriptPositionBiotype
ENSMUSG00000034290 (Nek9)
NIMA (never in mitosis gene a)-related expressed kinase 9 		ENSMUST00000040992 (Nek9-001) 85299514-85339362 protein_coding
ENSMUSG00000045064 (Zc2hc1c)
zinc finger, C2HC-type containing 1C 		ENSMUST00000059341 (Zc2hc1c-001) 85288591-85299358 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G4_0001ENSG00000119638ENST00000238616ENST00000553823ENST00000553945ENST00000554258ENST00000555405ENST00000555537ENST00000555763ENST00000555961ENST00000556170ENST00000557026ENST00000557673ENSG00000119640ENST00000238618ENST00000357971ENST00000553302ENST00000555135ENST00000555463ENST00000555694ENSG00000119703ENST00000238686ENST00000439583ENST00000524913ENST00000525046ENST00000526130ENST00000526748ENST00000532198ENST00000534151ENST00000554763ENSG00000258978ENST00000553642CIL_0003G4_0002ENSMUSG00000034290ENSMUST00000040992ENSMUSG00000045064ENSMUST00000059341
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003G4_0001ENSG00000119638ENST00000238616ENST00000555405ENST00000556170ENST00000557026ENST00000557673ENSG00000119640ENST00000238618ENSG00000119703ENST00000238686ENST00000439583ENST00000532198ENSG00000258978ENST00000553642CIL_0003G4_0002ENSMUSG00000034290ENSMUST00000040992ENSMUSG00000045064ENSMUST00000059341
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119638 ENST00000238616 N/A N/A N/A 0.834±0.51 N/A 0.939±0.00 N/A N/A 0.666±0.00 N/A N/A 1.281±0.67 N/A N/A
ENST00000553823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555405 N/A N/A 1.462±0.00 N/A 3.934±2.22 6.563±4.10 2.015±0.00 1.691±0.00 4.268±0.51 5.441±0.68 2.690±0.00 11.868±4.92 3.272±0.13 16.367±0.00
ENST00000555537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.406±0.00 N/A N/A
ENST00000557026 N/A N/A 2.036±0.00 3.851±3.24 5.962±4.46 8.129±0.00 0.735±0.00 2.496±0.90 3.408±0.00 5.873±0.00 2.237±0.00 4.693±3.13 9.122±0.00 15.430±2.01
ENST00000557673 N/A N/A N/A N/A N/A N/A N/A 6.611±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000119640 ENST00000238618 N/A N/A N/A 9.931±4.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000357971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119703 ENST00000238686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.011±0.00
ENST00000439583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 45.714±3.68
ENST00000524913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 90.539±0.00
ENST00000534151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258978 ENST00000553642 N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A 6.108±0.00 3.857±0.00 N/A 0.228±0.00 N/A 0.220±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034290 ENSMUST00000040992 24.158±2.56 18.658±6.47 27.888±1.56 10.731±2.65 17.697±0.66 14.182±1.22 23.831±1.40 15.005±0.34 8.176±1.26 22.740±4.09 44.536±2.27 21.448±3.47 13.547±3.70 10.610±1.77
ENSMUSG00000045064 ENSMUST00000059341 0.744±0.59 0.423±0.13 0.576±0.06 0.582±0.06 0.251±0.08 0.484±0.11 0.517±0.09 1.750±0.12 0.250±0.17 1.178±0.09 0.525±0.05 1.061±0.17 0.242±0.11 5.549±1.05

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