C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003GG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177182-ENSG00000198363 CGP 9606 8:61057158-61714640
GeneTranscriptPositionBiotype
ENSG00000213881 (NPM1P6)
nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 6 		ENST00000521088 (NPM1P6-001) 61202350-61203220 processed_pseudogene
ENSG00000222898 (RN7SKP97)
RNA, 7SK small nuclear pseudogene 97 		ENST00000410966 (RN7SKP97-201) 61631680-61632012 misc_RNA
ENSG00000254222 (RP11-787D18.2)
 ENST00000521378 (RP11-787D18.2-001) 61264624-61292039 antisense
ENSG00000254285 (KRT8P3)
keratin 8 pseudogene 3 		ENST00000519669 (KRT8P3-001) 61578220-61579668 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003GG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041216-ENSMUSG00000028207 CGP 10090 4:9269293-9669344
GeneTranscriptPositionBiotype
ENSMUSG00000086233 (Gm11816)
predicted gene 11816 		ENSMUST00000142744 (Gm11816-001) 9285827-9287333 antisense
ENSMUST00000149848 (Gm11816-002) 9283972-9287391 antisense
ENSMUSG00000087564 (Gm11817)
predicted gene 11817 		ENSMUST00000155578 (Gm11817-001) 9431961-9447199 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GG_0001ENSG00000213881ENST00000521088ENSG00000222898ENST00000410966ENSG00000254222ENST00000521378ENSG00000254285ENST00000519669CIL_0003GG_0002ENSMUSG00000086233ENSMUST00000142744ENSMUST00000149848ENSMUSG00000087564ENSMUST00000155578
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003GG_0001ENSG00000213881ENST00000521088ENSG00000222898ENST00000410966ENSG00000254222ENST00000521378ENSG00000254285ENST00000519669CIL_0003GG_0002ENSMUSG00000086233ENSMUST00000142744ENSMUST00000149848ENSMUSG00000087564ENSMUST00000155578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213881 ENST00000521088 0.139±0.00 0.175±0.00 N/A 0.051±0.00 0.182±0.00 0.242±0.00 0.130±0.00 0.105±0.00 0.082±0.00 0.189±0.01 0.095±0.00 0.074±0.00 0.069±0.00 0.125±0.07
ENSG00000222898 ENST00000410966 0.679±0.00 0.104±0.00 0.711±0.00 N/A 1.650±1.39 7.258±0.00 0.516±0.47 N/A 5.620±0.00 2.780±2.59 N/A 0.332±0.06 0.173±0.00 0.140±0.00
ENSG00000254222 ENST00000521378 N/A 0.043±0.00 N/A N/A N/A N/A N/A 0.257±0.00 N/A N/A N/A N/A N/A 2.231±0.26
ENSG00000254285 ENST00000519669 N/A N/A N/A 0.035±0.00 0.154±0.02 0.046±0.00 N/A 0.084±0.00 0.029±0.00 0.118±0.00 N/A 0.062±0.06 0.237±0.03 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000086233 ENSMUST00000142744 N/A N/A 1.870±0.16 N/A N/A 0.481±0.00 1.065±0.00 0.349±0.00 N/A 0.518±0.16 0.182±0.00 0.968±0.39 N/A 0.204±0.00
ENSMUST00000149848 2.286±0.39 0.161±0.06 3.635±0.02 0.322±0.03 2.362±1.51 0.582±0.24 1.473±0.66 0.136±0.06 N/A 0.908±0.50 0.138±0.05 0.943±0.46 0.057±0.03 0.133±0.07
ENSMUSG00000087564 ENSMUST00000155578 N/A N/A N/A 0.108±0.08 N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A 0.045±0.00

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