C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003HT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000237412-ENSG00000135902 CGP 9606 2:232520463-232536667
GeneTranscriptPositionBiotype
ENSG00000135902 (CHRND)
cholinergic receptor, nicotinic, delta (muscle) 		ENST00000258385 (CHRND-001) 232526184-232535838 protein_coding
ENST00000412233 (CHRND-004) 232526188-232531627 nonsense_mediated_decay
ENST00000441621 (CHRND-002) 232525993-232536667 nonsense_mediated_decay
ENST00000446616 (CHRND-005) 232526191-232535345 nonsense_mediated_decay
ENST00000449596 (CHRND-003) 232526160-232528913 protein_coding
ENST00000543200 (CHRND-201) 232526160-232536665 protein_coding
ENSG00000237412 (PRSS56)
protease, serine, 56 		ENST00000449534 (PRSS56-001) 232520463-232525712 protein_coding
ENST00000602410 (PRSS56-002) 232522501-232523330 retained_intron
ENST00000617714 (PRSS56-201) 232520463-232525716 protein_coding
CIL_0003HT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036480-ENSMUSG00000026251 CGP 10090 1:87183313-87200070
GeneTranscriptPositionBiotype
ENSMUSG00000026251 (Chrnd)
cholinergic receptor, nicotinic, delta polypeptide 		ENSMUST00000073252 (Chrnd-001) 87190637-87200070 protein_coding
ENSMUST00000186373 (Chrnd-002) 87190844-87200069 protein_coding
ENSMUST00000189970 (Chrnd-003) 87190607-87191766 retained_intron
ENSMUSG00000036480 (Prss56)
protease, serine 56 		ENSMUST00000044533 (Prss56-001) 87183313-87188405 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HT_0001ENSG00000135902ENST00000258385ENST00000412233ENST00000441621ENST00000446616ENST00000449596ENST00000543200ENSG00000237412ENST00000449534ENST00000602410ENST00000617714CIL_0003HT_0002ENSMUSG00000026251ENSMUST00000073252ENSMUST00000186373ENSMUST00000189970ENSMUSG00000036480ENSMUST00000044533
Region; Gene Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003HT_0001ENSG00000135902ENST00000258385ENST00000441621ENST00000446616ENST00000449596ENST00000543200ENSG00000237412ENST00000449534ENST00000602410ENST00000617714CIL_0003HT_0002ENSMUSG00000026251ENSMUST00000073252ENSMUST00000186373ENSMUST00000189970ENSMUSG00000036480ENSMUST00000044533
Gene Transcript Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135902 ENST00000258385 N/A N/A N/A N/A N/A N/A N/A N/A 3.938±0.00 0.060±0.00 N/A N/A
ENST00000412233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441621 N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A 4.559±1.71 0.036±0.00 N/A N/A
ENST00000446616 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A 7.228±0.00 N/A N/A 0.098±0.00
ENST00000449596 N/A 0.107±0.00 0.407±0.00 0.100±0.00 N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A
ENST00000543200 N/A N/A N/A 0.150±0.00 0.007±0.00 N/A N/A N/A 11.136±5.29 N/A N/A 0.521±0.44
ENSG00000237412 ENST00000449534 0.010±0.00 0.123±0.11 0.037±0.00 N/A 0.011±0.00 0.024±0.00 N/A N/A N/A 0.064±0.02 N/A 0.113±0.00
ENST00000602410 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.140±0.00 N/A N/A
ENST00000617714 0.010±0.00 0.016±0.00 0.037±0.00 N/A 0.011±0.00 0.024±0.00 N/A N/A N/A 0.083±0.00 N/A 0.095±0.07
Gene Transcript Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026251 ENSMUST00000073252 N/A 0.079±0.00 0.163±0.02 0.012±0.00 N/A 0.007±0.00 0.034±0.06 0.191±0.03 0.845±0.23 0.189±0.08 0.003±0.00 0.027±0.02
ENSMUST00000186373 N/A N/A N/A 0.005±0.00 N/A 0.001±0.00 0.001±0.00 N/A N/A 0.144±0.05 N/A 0.002±0.00
ENSMUST00000189970 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.04 0.074±0.00 N/A
ENSMUSG00000036480 ENSMUST00000044533 0.026±0.01 0.639±0.63 0.014±0.00 N/A 0.015±0.00 N/A 0.006±0.00 0.013±0.00 N/A 0.365±0.21 0.003±0.00 11.254±0.19

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