C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003IL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000185689-ENSG00000198721 CGP 9606 6:4079209-4135597
GeneTranscriptPositionBiotype
ENSG00000145975 (FAM217A)
family with sequence similarity 217, member A 		ENST00000274673 (FAM217A-001) 4068362-4079221 protein_coding
ENST00000380188 (FAM217A-003) 4068367-4087344 processed_transcript
ENST00000463904 (FAM217A-009) 4049434-4050518 processed_transcript
ENST00000469157 (FAM217A-008) 4050461-4087332 processed_transcript
ENST00000478714 (FAM217A-005) 4073458-4079221 processed_transcript
ENST00000492651 (FAM217A-007) 4073292-4079100 protein_coding
ENST00000498677 (FAM217A-006) 4069891-4079134 protein_coding
ENSG00000198721 (ECI2)
enoyl-CoA delta isomerase 2 		ENST00000361538 (ECI2-006) 4115706-4135597 protein_coding
ENST00000380118 (ECI2-003) 4115689-4135597 protein_coding
ENST00000380120 (ECI2-007) 4115702-4135590 nonsense_mediated_decay
ENST00000380125 (ECI2-001) 4115693-4135468 protein_coding
ENST00000464057 (ECI2-002) 4115706-4135575 retained_intron
ENST00000464583 (ECI2-004) 4115708-4133782 retained_intron
ENST00000465828 (ECI2-005) 4115707-4135557 protein_coding
ENST00000478266 (ECI2-010) 4115706-4135564 nonsense_mediated_decay
ENST00000489086 (ECI2-011) 4130318-4135573 retained_intron
ENST00000495548 (ECI2-009) 4127814-4135459 protein_coding
ENST00000496241 (ECI2-008) 4115700-4135591 nonsense_mediated_decay

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003IL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021415-ENSMUSG00000021416 CGP 10090 13:34924409-34963810
GeneTranscriptPositionBiotype
ENSMUSG00000021415 (4933417A18Rik)
RIKEN cDNA 4933417A18 gene 		ENSMUST00000160279 (4933417A18Rik-001) 34924409-34953197 protein_coding
ENSMUST00000160905 (4933417A18Rik-002) 34924409-34955875 nonsense_mediated_decay
ENSMUSG00000021416 (Eci3)
enoyl-Coenzyme A delta isomerase 3 		ENSMUST00000021853 (Eci3-001) 34946614-34963810 protein_coding
ENSMUST00000164155 (Eci3-002) 34948084-34963788 protein_coding
ENSMUSG00000098209 (Gm8245)
predicted gene 8245 		ENSMUST00000182434 (Gm8245-001) 34940644-34941629 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IL_0001ENSG00000145975ENST00000274673ENST00000380188ENST00000463904ENST00000469157ENST00000478714ENST00000492651ENST00000498677ENSG00000198721ENST00000361538ENST00000380118ENST00000380120ENST00000380125ENST00000464057ENST00000464583ENST00000465828ENST00000478266ENST00000489086ENST00000495548ENST00000496241CIL_0003IL_0002ENSMUSG00000021415ENSMUST00000160279ENSMUST00000160905ENSMUSG00000021416ENSMUST00000021853ENSMUST00000164155ENSMUSG00000098209ENSMUST00000182434
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003IL_0001ENSG00000145975ENST00000274673ENST00000380188ENSG00000198721ENST00000361538ENST00000380118ENST00000380120ENST00000464057ENST00000464583ENST00000478266ENST00000489086ENST00000496241CIL_0003IL_0002ENSMUSG00000021415ENSMUST00000160279ENSMUST00000160905ENSMUSG00000021416ENSMUST00000021853ENSMUST00000164155ENSMUSG00000098209ENSMUST00000182434
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145975 ENST00000274673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.582±2.16
ENST00000380188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.371±0.00
ENST00000463904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198721 ENST00000361538 15.352±0.00 9.231±0.00 6.887±0.00 3.293±1.73 11.042±8.64 10.698±4.26 20.329±0.00 21.266±1.77 12.102±10.96 10.619±0.00 28.844±22.56 14.022±5.74 10.745±4.63 12.386±0.00
ENST00000380118 16.286±0.00 4.493±0.00 3.419±0.00 5.755±3.49 4.437±2.45 5.514±3.18 13.095±6.27 29.443±1.84 6.249±2.78 3.035±0.09 17.533±6.94 12.412±5.28 12.432±4.24 N/A
ENST00000380120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 21.551±6.44
ENST00000380125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464057 N/A N/A N/A N/A 1.171±0.00 N/A N/A N/A 0.964±0.00 1.648±0.00 N/A N/A N/A N/A
ENST00000464583 N/A N/A 1.342±0.00 0.826±0.47 0.462±0.00 0.726±0.00 N/A N/A N/A 0.705±0.00 N/A 1.154±0.56 N/A N/A
ENST00000465828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.728±0.00 16.039±0.00 N/A
ENST00000489086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.222±0.00 N/A N/A
ENST00000495548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.981±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021415 ENSMUST00000160279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A 50.861±10.93
ENSMUST00000160905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.827±0.00
ENSMUSG00000021416 ENSMUST00000021853 2.375±1.58 0.213±0.03 0.259±0.04 0.102±0.06 1.654±0.65 1.738±0.52 0.149±0.00 64.729±5.08 1.190±1.24 0.052±0.00 0.086±0.03 0.457±0.42 1.013±0.89 N/A
ENSMUST00000164155 1.320±0.66 0.379±0.16 N/A 1.070±0.00 1.227±0.39 0.577±0.15 0.064±0.02 13.056±1.53 0.609±0.47 0.076±0.00 0.094±0.04 0.216±0.02 0.363±0.12 N/A
ENSMUSG00000098209 ENSMUST00000182434 0.029±0.00 0.070±0.00 N/A 0.007±0.00 0.055±0.02 0.064±0.00 N/A 0.214±0.05 N/A N/A N/A 0.046±0.00 0.029±0.02 0.158±0.09

Loading