C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 4933417A18 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021415 4933417A18Rik 10090 + 13:34924409-34955875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000160279 4933417A18Rik-001 34924409-34953197 protein_coding
  ENSMUST00000160905 4933417A18Rik-002 34924409-34955875 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000160279ENSMUST00000160905
Transcript ID Ovary Testis
ENSMUST00000160279 0.025±0.00 50.861±10.93
ENSMUST00000160905 N/A 4.827±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y7 CIL_0007Y7_0002 VISTA 13:34527566-35128899
CIL_0003IS CIL_0003IS_0002 CGP 13:34909964-34955875
CIL_000818 CIL_000818_0002 VISTA 13:34912312-35513577
CIL_0003IL CIL_0003IL_0002 CGP 13:34924409-34963810

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000185689 C6orf201 chromosome 6 open reading frame 201 protein_coding Homo_sapiens

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