C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003J3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150977-ENSG00000184209 CGP 9606 12:123410683-123473154
GeneTranscriptPositionBiotype
ENSG00000150977 (RILPL2)
Rab interacting lysosomal protein-like 2 		ENST00000280571 (RILPL2-001) 123410683-123436717 protein_coding
ENSG00000184209 (SNRNP35)
small nuclear ribonucleoprotein 35kDa (U11/U12) 		ENST00000350887 (SNRNP35-003) 123464506-123466390 protein_coding
ENST00000412157 (SNRNP35-002) 123459523-123466299 protein_coding
ENST00000526639 (SNRNP35-001) 123457641-123466936 protein_coding
ENST00000527158 (SNRNP35-004) 123458119-123473154 processed_transcript
ENST00000529201 (SNRNP35-007) 123458127-123464899 processed_transcript
ENST00000529904 (SNRNP35-005) 123458088-123459216 processed_transcript
ENSG00000188026 (RILPL1)
Rab interacting lysosomal protein-like 1 		ENST00000340724 (RILPL1-003) 123472068-123514428 protein_coding
ENST00000376874 (RILPL1-001) 123470054-123533718 protein_coding
ENST00000544468 (RILPL1-004) 123472167-123484974 protein_coding
ENSG00000270445 (RP11-972P1.8)
 ENST00000605712 (RP11-972P1.8-001) 123441517-123441852 processed_pseudogene
ENSG00000280328 (RP11-972P1.7)
 ENST00000623184 (RP11-972P1.7-001) 123472200-123476093 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0003J3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029401-ENSMUSG00000029402 CGP 10090 5:124463265-124491124
GeneTranscriptPositionBiotype
ENSMUSG00000029401 (Rilpl2)
Rab interacting lysosomal protein-like 2 		ENSMUST00000031347 (Rilpl2-001) 124463265-124478366 protein_coding
ENSMUSG00000029402 (Snrnp35)
small nuclear ribonucleoprotein 35 (U11/U12) 		ENSMUST00000031349 (Snrnp35-001) 124483134-124491124 protein_coding
ENSMUST00000111453 (Snrnp35-002) 124483458-124491107 protein_coding
ENSMUST00000136567 (Snrnp35-003) 124483202-124490490 protein_coding
ENSMUSG00000082402 (Gm15621)
predicted gene 15621 		ENSMUST00000119162 (Gm15621-001) 124472427-124472790 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J3_0001ENSG00000150977ENST00000280571ENSG00000184209ENST00000350887ENST00000412157ENST00000526639ENST00000527158ENST00000529201ENST00000529904ENSG00000188026ENST00000340724ENST00000376874ENST00000544468ENSG00000270445ENST00000605712ENSG00000280328ENST00000623184CIL_0003J3_0002ENSMUSG00000029401ENSMUST00000031347ENSMUSG00000029402ENSMUST00000031349ENSMUST00000111453ENSMUST00000136567ENSMUSG00000082402ENSMUST00000119162
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003J3_0001ENSG00000150977ENST00000280571ENSG00000184209ENST00000350887ENST00000526639ENSG00000188026ENST00000340724ENST00000376874ENST00000544468ENSG00000270445ENST00000605712ENSG00000280328ENST00000623184CIL_0003J3_0002ENSMUSG00000029401ENSMUST00000031347ENSMUSG00000029402ENSMUST00000031349ENSMUST00000111453ENSMUST00000136567ENSMUSG00000082402ENSMUST00000119162
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150977 ENST00000280571 7.931±0.00 8.274±0.00 0.914±0.00 1.057±0.73 2.605±1.92 1.939±1.78 0.760±0.60 2.231±1.83 1.022±0.18 4.447±3.14 0.401±0.32 3.126±1.45 2.941±0.75 2.693±1.77
ENSG00000184209 ENST00000350887 10.624±0.00 24.771±0.00 N/A 14.418±0.00 18.277±0.00 11.635±0.00 14.911±0.00 14.375±0.00 11.276±0.00 8.472±0.00 33.467±0.00 16.832±5.42 21.820±4.53 14.615±7.87
ENST00000412157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526639 N/A N/A N/A N/A 0.374±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.601±0.00
ENST00000527158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188026 ENST00000340724 N/A N/A N/A 1.754±0.00 N/A N/A N/A N/A N/A N/A N/A 0.645±0.00 N/A 2.057±0.00
ENST00000376874 2.145±0.00 3.746±0.00 0.357±0.00 2.122±0.27 1.423±1.02 3.517±0.00 5.862±4.90 1.092±0.74 1.126±0.60 0.536±0.00 8.468±4.40 2.872±1.69 7.391±1.54 2.488±0.00
ENST00000544468 N/A N/A N/A N/A N/A N/A 25.792±0.00 N/A N/A 4.398±0.00 N/A 2.109±0.00 N/A N/A
ENSG00000270445 ENST00000605712 N/A 0.181±0.00 N/A 0.094±0.00 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A 0.204±0.00 0.123±0.00
ENSG00000280328 ENST00000623184 N/A N/A 0.690±0.00 1.585±0.00 0.366±0.00 0.587±0.27 N/A N/A N/A 1.042±0.13 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029401 ENSMUST00000031347 15.725±4.09 14.421±5.75 8.952±1.18 7.212±0.68 14.644±6.08 8.266±2.55 3.011±0.31 20.700±1.29 6.501±2.36 9.751±0.90 2.553±0.36 23.070±4.27 21.633±7.90 10.865±2.71
ENSMUSG00000029402 ENSMUST00000031349 2.099±0.67 0.353±0.14 2.614±0.18 6.704±3.80 0.719±0.23 1.524±0.57 1.534±0.48 1.974±0.60 3.020±2.68 2.270±0.56 8.616±1.09 2.848±3.56 12.915±7.37 12.819±7.42
ENSMUST00000111453 1.305±0.11 1.129±0.08 0.799±0.12 2.864±0.00 0.843±0.26 0.507±0.18 0.713±0.17 1.187±0.48 0.679±0.16 0.632±0.17 3.505±0.85 1.351±0.67 1.037±0.01 17.715±8.03
ENSMUST00000136567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.842±0.00 6.318±0.00 N/A
ENSMUSG00000082402 ENSMUST00000119162 0.306±0.13 N/A 0.041±0.00 N/A 0.374±0.05 N/A 0.152±0.00 0.542±0.22 0.107±0.02 0.610±0.38 0.169±0.00 0.536±0.39 0.078±0.00 0.440±0.09

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