C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003KZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027552-ENSDARG00000005786 CGP 7955 5:14307197-14404537
GeneTranscriptPositionBiotype
ENSDARG00000005786 (ppm1f)
protein phosphatase 1F (PP2C domain containing) 		ENSDART00000051666 (ppm1f-201) 14383696-14404537 protein_coding
ENSDARG00000027552 (mapk1)
mitogen-activated protein kinase 1 		ENSDART00000030213 (mapk1-001) 14307197-14369466 protein_coding
ENSDART00000149440 (mapk1-003) 14333745-14369466 retained_intron
ENSDART00000149700 (mapk1-002) 14313229-14369443 protein_coding
ENSDART00000150095 (mapk1-004) 14313281-14322939 nonsense_mediated_decay
CIL_0003KZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100030-ENSG00000100034 CGP 9606 22:21754500-21952837
GeneTranscriptPositionBiotype
ENSG00000100030 (MAPK1)
mitogen-activated protein kinase 1 		ENST00000215832 (MAPK1-001) 21754500-21867629 protein_coding
ENST00000398822 (MAPK1-002) 21769040-21867680 protein_coding
ENST00000491588 (MAPK1-003) 21763984-21769428 processed_transcript
ENST00000544786 (MAPK1-201) 21769204-21867440 protein_coding
ENSG00000100034 (PPM1F)
protein phosphatase, Mg2+/Mn2+ dependent, 1F 		ENST00000263212 (PPM1F-001) 21919420-21952837 protein_coding
ENST00000397495 (PPM1F-003) 21924876-21952831 protein_coding
ENST00000407142 (PPM1F-002) 21919427-21938584 protein_coding
ENST00000424647 (PPM1F-007) 21934024-21938576 protein_coding
ENST00000445205 (PPM1F-004) 21931266-21940657 protein_coding
ENST00000484588 (PPM1F-005) 21924876-21931248 processed_transcript
ENST00000486259 (PPM1F-008) 21936962-21938531 processed_transcript
ENST00000496143 (PPM1F-006) 21923125-21926062 processed_transcript
ENST00000497072 (PPM1F-009) 21952020-21952821 processed_transcript
ENST00000623652 (PPM1F-010) 21932714-21936929 retained_intron
ENSG00000200985 (RNA5SP493)
RNA, 5S ribosomal pseudogene 493 		ENST00000364115 (RNA5SP493-201) 21792434-21792524 rRNA
ENSG00000224086 (LL22NC03-86G7.1)
 ENST00000458178 (LL22NC03-86G7.1-001) 21938293-21977632 antisense
ENSG00000225544 (KB-1027C11.4)
 ENST00000435222 (KB-1027C11.4-001) 21885282-21885673 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KZ_0001ENSDARG00000005786ENSDART00000051666ENSDARG00000027552ENSDART00000030213ENSDART00000149440ENSDART00000149700ENSDART00000150095CIL_0003KZ_0002ENSG00000100030ENST00000215832ENST00000398822ENST00000491588ENST00000544786ENSG00000100034ENST00000263212ENST00000397495ENST00000407142ENST00000424647ENST00000445205ENST00000484588ENST00000486259ENST00000496143ENST00000497072ENST00000623652ENSG00000200985ENST00000364115ENSG00000224086ENST00000458178ENSG00000225544ENST00000435222
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003KZ_0001ENSDARG00000005786ENSDART00000051666ENSDARG00000027552ENSDART00000030213ENSDART00000149440CIL_0003KZ_0002ENSG00000100030ENST00000215832ENST00000398822ENST00000544786ENSG00000100034ENST00000263212ENST00000397495ENSG00000200985ENST00000364115ENSG00000224086ENST00000458178ENSG00000225544ENST00000435222
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005786 ENSDART00000051666 N/A N/A N/A 0.334±0.13 N/A N/A 0.152±0.08 0.213±0.00 0.091±0.00 N/A N/A N/A N/A N/A
ENSDARG00000027552 ENSDART00000030213 N/A N/A N/A 24.275±3.05 N/A N/A 3.531±0.84 3.365±0.00 0.950±0.00 N/A 9.774±0.00 N/A N/A N/A
ENSDART00000149440 N/A N/A N/A N/A N/A N/A N/A 1.333±0.35 N/A N/A N/A N/A N/A N/A
ENSDART00000149700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100030 ENST00000215832 N/A N/A 2.275±0.00 17.453±7.56 3.273±0.00 5.743±2.30 1.429±0.00 2.288±0.00 1.908±0.00 2.523±0.00 3.374±2.10 4.639±3.64 7.267±0.00 7.081±0.00
ENST00000398822 11.322±0.00 N/A 2.983±0.00 14.817±0.00 N/A 4.123±0.00 8.022±4.84 7.973±0.00 8.762±0.00 13.020±0.00 3.056±0.00 11.325±1.33 11.886±1.33 22.460±0.04
ENST00000491588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544786 N/A N/A 5.348±0.00 28.663±0.00 8.118±0.00 11.444±0.00 N/A N/A 8.246±0.00 12.007±0.00 9.355±3.00 23.067±0.00 N/A 23.240±0.00
ENSG00000100034 ENST00000263212 10.222±0.00 9.448±0.00 0.850±0.00 1.431±0.01 3.049±1.26 5.033±0.00 2.232±1.80 1.716±1.01 1.366±0.68 5.675±4.21 0.687±0.00 4.000±2.48 10.508±3.60 3.217±1.89
ENST00000397495 N/A N/A 1.245±0.00 N/A N/A N/A 0.508±0.00 1.215±0.00 N/A N/A N/A N/A N/A N/A
ENST00000407142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496143 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000623652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000200985 ENST00000364115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.351±0.00 N/A N/A
ENSG00000224086 ENST00000458178 0.300±0.00 N/A N/A 0.221±0.09 0.227±0.06 0.164±0.02 0.102±0.06 0.154±0.03 0.101±0.00 0.204±0.00 0.055±0.02 0.185±0.06 N/A 0.205±0.00
ENSG00000225544 ENST00000435222 N/A 0.220±0.00 N/A 0.077±0.00 0.401±0.00 1.768±0.00 N/A 1.732±0.00 N/A N/A N/A 1.096±0.78 N/A N/A

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