C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat and SOCS box containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000555019 ASB2-002 ENSG00000100628 9606 - 14:93934153-93976791 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000555019
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000555019 0.211±0.00 3.685±0.00 0.773±0.00 3.908±2.87 13.007±12.26 28.564±24.50 0.229±0.00 3.618±0.00 1.488±1.32 117.547±83.80 4.024±1.37 7.342±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QU CIL_0003QU_0001 CGP 14:93918894-93976791
CIL_0003QT CIL_0003QT_0001 CGP 14:93934153-94048930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IEA protein polyubiquitination
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0007165 TAS signal transduction
GO:0031466 IEA Cul5-RING ubiquitin ligase complex
GO:0035556 IEA intracellular signal transduction
GO:0035914 IEA skeletal muscle cell differentiation
GO:0042787 IEA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0045445 IEA myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021617 Asb2-001 protein_coding Mus_musculus 0 2296
ENSMUST00000149431 Asb2-002 protein_coding Mus_musculus 0 1941
ENSMUST00000127447 Asb2-003 retained_intron Mus_musculus 0 1640
ENSMUST00000135694 Asb2-004 processed_transcript Mus_musculus 0 346

Loading