C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003R6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006219-ENSDARG00000040157 CGP 7955 11:4021604-4049994
GeneTranscriptPositionBiotype
ENSDARG00000040157 (glt8d1)
glycosyltransferase 8 domain containing 1 		ENSDART00000058735 (glt8d1-001) 4034061-4049994 protein_coding
CIL_0003R6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163938-ENSG00000016864 CGP 9606 3:52681156-52706083
GeneTranscriptPositionBiotype
ENSG00000163938 (GNL3)
guanine nucleotide binding protein-like 3 (nucleolar) 		ENST00000394799 (GNL3-002) 52686016-52694492 protein_coding
ENST00000418458 (GNL3-001) 52685920-52694492 protein_coding
ENST00000460073 (GNL3-009) 52686177-52688190 processed_transcript
ENST00000462550 (GNL3-006) 52686032-52687827 retained_intron
ENST00000468146 (GNL3-007) 52686005-52689086 processed_transcript
ENST00000468885 (GNL3-005) 52686030-52686955 retained_intron
ENST00000474423 (GNL3-008) 52686171-52687616 protein_coding
ENST00000479230 (GNL3-011) 52681156-52689105 protein_coding
ENST00000484022 (GNL3-010) 52688925-52692929 retained_intron
ENST00000492349 (GNL3-003) 52686032-52690704 nonsense_mediated_decay
ENST00000496254 (GNL3-004) 52686049-52694459 retained_intron
ENST00000497356 (GNL3-012) 52693170-52693779 retained_intron
ENSG00000212452 (SNORD69)
small nucleolar RNA, C/D box 69 		ENST00000391150 (SNORD69-201) 52692736-52692812 snoRNA
ENSG00000212493 (SNORD19)
small nucleolar RNA, C/D box 19 		ENST00000391191 (SNORD19-201) 52689248-52689315 snoRNA
ENSG00000222345 (SNORD19)
Small nucleolar RNA SNORD19 		ENST00000410413 (SNORD19.1-201) 52691378-52691453 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R6_0001ENSDARG00000040157ENSDART00000058735CIL_0003R6_0002ENSG00000163938ENST00000394799ENST00000418458ENST00000460073ENST00000462550ENST00000468146ENST00000468885ENST00000474423ENST00000479230ENST00000484022ENST00000492349ENST00000496254ENST00000497356ENSG00000212452ENST00000391150ENSG00000212493ENST00000391191ENSG00000222345ENST00000410413
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003R6_0001ENSDARG00000040157ENSDART00000058735CIL_0003R6_0002ENSG00000163938ENST00000394799ENST00000418458ENST00000484022ENST00000496254ENST00000497356ENSG00000212452ENST00000391150ENSG00000212493ENST00000391191ENSG00000222345ENST00000410413
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040157 ENSDART00000058735 N/A N/A N/A 2.035±1.13 N/A N/A 1.785±0.47 2.486±1.38 2.420±0.00 N/A 0.707±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163938 ENST00000394799 N/A N/A N/A N/A N/A 4.010±0.00 N/A N/A N/A N/A N/A 22.752±0.00 N/A N/A
ENST00000418458 18.730±0.00 31.529±0.00 N/A 13.853±6.52 13.418±3.71 17.272±0.00 7.100±5.02 18.712±0.00 16.865±13.19 15.849±9.57 16.741±14.39 25.063±12.51 16.599±0.58 30.157±6.14
ENST00000460073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484022 N/A N/A N/A N/A 26.964±0.00 N/A N/A N/A 15.593±0.00 N/A N/A N/A N/A N/A
ENST00000492349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496254 N/A N/A 2.525±0.00 N/A N/A 6.165±0.00 N/A N/A N/A N/A N/A 6.259±0.00 N/A N/A
ENST00000497356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 312.663±0.00 100.596±0.00 184.073±0.00
ENSG00000212452 ENST00000391150 0.347±0.00 2.163±0.00 N/A N/A N/A N/A N/A N/A 2.193±0.00 1.018±0.00 N/A N/A N/A 1.543±0.03
ENSG00000212493 ENST00000391191 1.408±0.00 4.420±0.00 N/A 1.429±0.00 5.766±0.00 N/A N/A 0.944±0.00 N/A N/A N/A N/A N/A 3.889±0.00
ENSG00000222345 ENST00000410413 N/A 0.305±0.00 N/A N/A N/A N/A 0.262±0.00 0.283±0.00 0.784±0.00 0.779±0.00 N/A 48.377±47.21 N/A N/A

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