C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003TJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089957-ENSDARG00000033861 CGP 7955 7:75111553-75143821
GeneTranscriptPositionBiotype
ENSDARG00000033861 (sepsecs)
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 		ENSDART00000042492 (sepsecs-201) 75125540-75143821 protein_coding
ENSDARG00000089957 (lgi2a)
leucine-rich repeat LGI family, member 2a 		ENSDART00000124827 (lgi2a-201) 75111553-75121942 protein_coding
CIL_0003TJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153012-ENSG00000109618 CGP 9606 4:24998847-25160442
GeneTranscriptPositionBiotype
ENSG00000109618 (SEPSECS)
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 		ENST00000358971 (SEPSECS-003) 25122255-25160394 nonsense_mediated_decay
ENST00000382103 (SEPSECS-001) 25120014-25160442 protein_coding
ENST00000503150 (SEPSECS-006) 25124081-25156098 nonsense_mediated_decay
ENST00000505513 (SEPSECS-005) 25127264-25155231 retained_intron
ENST00000513285 (SEPSECS-004) 25158945-25160398 protein_coding
ENST00000514585 (SEPSECS-002) 25123850-25160431 nonsense_mediated_decay
ENST00000515272 (SEPSECS-007) 25125301-25127308 processed_transcript
ENSG00000153012 (LGI2)
leucine-rich repeat LGI family, member 2 		ENST00000382114 (LGI2-001) 24998847-25030879 protein_coding
ENST00000512108 (LGI2-003) 24999767-25030665 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TJ_0001ENSDARG00000033861ENSDART00000042492ENSDARG00000089957ENSDART00000124827CIL_0003TJ_0002ENSG00000109618ENST00000358971ENST00000382103ENST00000503150ENST00000505513ENST00000513285ENST00000514585ENST00000515272ENSG00000153012ENST00000382114ENST00000512108
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TJ_0001ENSDARG00000033861ENSDART00000042492ENSDARG00000089957ENSDART00000124827CIL_0003TJ_0002ENSG00000109618ENST00000358971ENST00000382103ENST00000514585ENSG00000153012ENST00000382114ENST00000512108
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000033861 ENSDART00000042492 N/A N/A N/A 2.303±0.79 N/A N/A 2.198±0.26 6.564±0.00 1.182±0.00 N/A 1.974±0.00 N/A N/A N/A
ENSDARG00000089957 ENSDART00000124827 N/A N/A N/A 13.685±3.31 N/A N/A 0.200±0.03 2.536±0.00 0.081±0.00 N/A 0.713±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109618 ENST00000358971 0.365±0.00 N/A 1.875±0.00 0.589±0.00 0.656±0.15 1.563±1.11 0.185±0.08 1.628±0.96 N/A 0.639±0.00 0.336±0.00 N/A N/A 1.115±0.00
ENST00000382103 1.058±0.00 N/A N/A 0.612±0.00 0.442±0.03 0.530±0.04 0.180±0.01 1.876±1.00 1.270±0.64 0.337±0.19 0.103±0.00 0.909±0.16 0.711±0.03 1.153±0.32
ENST00000503150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514585 N/A N/A N/A N/A 1.886±0.00 N/A 0.609±0.00 N/A 1.580±0.00 1.727±0.00 0.277±0.00 1.797±0.77 2.383±0.00 3.896±2.13
ENST00000515272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153012 ENST00000382114 1.051±0.00 3.843±0.00 0.593±0.00 1.154±0.01 0.641±0.10 0.482±0.26 0.468±0.26 1.681±0.00 0.144±0.13 0.523±0.27 0.138±0.00 1.110±0.74 1.191±0.13 0.994±0.87
ENST00000512108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.120±0.00 N/A N/A N/A

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