C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003U8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075621-ENSDARG00000089276 CGP 7955 12:36887884-36907313
GeneTranscriptPositionBiotype
ENSDARG00000075621 (birc5a)
baculoviral IAP repeat-containing 5a 		ENSDART00000115088 (birc5a-001) 36887884-36893786 protein_coding
ENSDARG00000089276 (TMEM235 (1 of 2))
transmembrane protein 235 		ENSDART00000129501 (TMEM235 (1 of 2)-001) 36895579-36907313 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003U8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000089685-ENSG00000204278 CGP 9606 17:78214186-78240987
GeneTranscriptPositionBiotype
ENSG00000089685 (BIRC5)
baculoviral IAP repeat containing 5 		ENST00000301633 (BIRC5-004) 78214186-78225636 protein_coding
ENST00000350051 (BIRC5-001) 78214198-78225636 protein_coding
ENST00000374948 (BIRC5-002) 78214264-78225636 protein_coding
ENST00000586192 (BIRC5-009) 78214385-78222979 nonsense_mediated_decay
ENST00000587746 (BIRC5-010) 78214385-78222979 protein_coding
ENST00000589892 (BIRC5-012) 78216427-78223856 processed_transcript
ENST00000590449 (BIRC5-003) 78214280-78215099 protein_coding
ENST00000590925 (BIRC5-006) 78214263-78223554 nonsense_mediated_decay
ENST00000591800 (BIRC5-011) 78214385-78222979 nonsense_mediated_decay
ENST00000592115 (BIRC5-008) 78214365-78222979 retained_intron
ENST00000592734 (BIRC5-005) 78214317-78222992 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003U8_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017716-ENSMUSG00000070330 CGP 10090 11:117849251-117865543
GeneTranscriptPositionBiotype
ENSMUSG00000017716 (Birc5)
baculoviral IAP repeat-containing 5 		ENSMUST00000081387 (Birc5-001) 117849251-117855732 protein_coding
ENSMUST00000093906 (Birc5-002) 117849319-117855743 protein_coding
ENSMUSG00000070330 (Tmem235)
transmembrane protein 235 		ENSMUST00000093905 (Tmem235-001) 117860752-117865543 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003U8_0001ENSDARG00000075621ENSDART00000115088ENSDARG00000089276ENSDART00000129501CIL_0003U8_0002ENSG00000089685ENST00000301633ENST00000350051ENST00000374948ENST00000586192ENST00000587746ENST00000589892ENST00000590449ENST00000590925ENST00000591800ENST00000592115ENST00000592734CIL_0003U8_0003ENSMUSG00000017716ENSMUST00000081387ENSMUST00000093906ENSMUSG00000070330ENSMUST00000093905
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003U8_0001ENSDARG00000075621ENSDART00000115088ENSDARG00000089276ENSDART00000129501CIL_0003U8_0002ENSG00000089685ENST00000301633ENST00000350051ENST00000374948ENST00000589892ENST00000590925ENST00000592115CIL_0003U8_0003ENSMUSG00000017716ENSMUST00000081387ENSMUST00000093906ENSMUSG00000070330ENSMUST00000093905
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075621 ENSDART00000115088 N/A N/A N/A 0.334±0.21 N/A N/A 0.384±0.12 3.868±1.74 0.101±0.00 N/A 0.069±0.00 N/A N/A N/A
ENSDARG00000089276 ENSDART00000129501 N/A N/A N/A 2.332±0.88 N/A N/A 0.049±0.00 1.100±0.88 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089685 ENST00000301633 N/A 0.292±0.00 0.037±0.00 N/A N/A N/A 0.089±0.00 0.290±0.00 N/A 0.377±0.00 N/A 0.749±0.00 0.966±0.00 N/A
ENST00000350051 0.392±0.00 N/A N/A 0.046±0.00 0.429±0.00 2.168±0.00 N/A 0.170±0.00 0.064±0.00 N/A N/A 5.996±6.20 6.089±2.29 8.475±5.91
ENST00000374948 N/A 0.418±0.00 N/A N/A 0.391±0.00 0.425±0.00 0.055±0.00 N/A N/A N/A 0.047±0.00 1.673±0.00 N/A N/A
ENST00000586192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589892 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A 0.210±0.00 0.350±0.00 N/A 9.049±0.00 3.996±0.00 7.752±0.00
ENST00000590449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590925 N/A N/A N/A N/A 0.387±0.00 N/A N/A N/A N/A 0.520±0.00 N/A N/A N/A 7.701±0.00
ENST00000591800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592115 N/A 0.210±0.00 0.179±0.00 0.083±0.01 0.195±0.01 N/A 0.098±0.00 N/A 0.046±0.01 0.575±0.00 0.134±0.12 N/A N/A N/A
ENST00000592734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017716 ENSMUST00000081387 2.746±2.10 1.956±0.40 1.401±0.30 11.113±8.28 1.371±0.60 7.351±1.42 0.201±0.12 0.556±0.20 80.098±76.69 1.098±0.21 0.111±0.09 12.092±12.32 86.373±85.14 36.568±15.91
ENSMUST00000093906 0.636±0.48 0.398±0.18 0.301±0.06 2.370±2.08 0.362±0.09 1.810±0.89 0.065±0.02 0.129±0.05 6.847±7.45 0.336±0.10 0.023±0.01 2.585±0.93 2.544±2.02 2.186±0.15
ENSMUSG00000070330 ENSMUST00000093905 N/A N/A N/A 0.041±0.01 N/A 0.037±0.01 N/A 0.033±0.01 0.020±0.01 N/A N/A 0.053±0.00 0.021±0.01 2.176±1.14

Loading