C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 235
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093905 Tmem235-001 ENSMUSG00000070330 10090 + 11:117860752-117865543 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000093905
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000093905 0.041±0.01 0.037±0.01 0.033±0.01 0.020±0.01 0.053±0.00 0.021±0.01 2.176±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0002 VISTA 11:117565410-118167678
CIL_0003U8 CIL_0003U8_0003 CGP 11:117849251-117865543
CIL_0001VZ CIL_0001VZ_0002 CGP 11:117860752-117873481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005198 IEA structural molecule activity
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005923 IEA tight junction
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016324 IDA apical plasma membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374946 TMEM235-201 protein_coding Homo_sapiens 1e-25 122
ENST00000421688 TMEM235-202 protein_coding Homo_sapiens 0 436
ENST00000550981 TMEM235-001 protein_coding Homo_sapiens 9e-26 122
ENST00000551068 TMEM235-003 protein_coding Homo_sapiens 0 436
ENST00000586400 TMEM235-002 protein_coding Homo_sapiens 1e-25 122
ENST00000591033 TMEM235-004 protein_coding Homo_sapiens 1e-38 165

Loading