C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003UM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040557-ENSDARG00000040555 CGP 7955 18:34400131-34421744
GeneTranscriptPositionBiotype
ENSDARG00000040555 (bckdha)
branched chain keto acid dehydrogenase E1, alpha polypeptide 		ENSDART00000059347 (bckdha-001) 34406225-34421744 protein_coding
ENSDART00000125820 (bckdha-201) 34406245-34421742 protein_coding
ENSDARG00000040557 (exosc5)
exosome component 5 		ENSDART00000059352 (exosc5-001) 34400131-34405923 protein_coding
ENSDART00000145177 (exosc5-002) 34402841-34405923 protein_coding
CIL_0003UM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000077348-ENSG00000248098 CGP 9606 19:41386374-41431345
GeneTranscriptPositionBiotype
ENSG00000077348 (EXOSC5)
exosome component 5 		ENST00000221233 (EXOSC5-001) 41386374-41397479 protein_coding
ENST00000593523 (EXOSC5-002) 41391537-41397356 retained_intron
ENST00000593771 (EXOSC5-004) 41391890-41397331 protein_coding
ENST00000596905 (EXOSC5-005) 41386415-41397342 protein_coding
ENST00000602129 (EXOSC5-003) 41386376-41397256 protein_coding
ENSG00000105341 (ATP5SL)
ATP5S-like 		ENST00000221943 (ATP5SL-007) 41431319-41439905 protein_coding
ENST00000301183 (ATP5SL-006) 41431756-41439539 protein_coding
ENST00000417807 (ATP5SL-004) 41431988-41439539 protein_coding
ENST00000438807 (ATP5SL-002) 41431318-41439910 protein_coding
ENST00000586786 (ATP5SL-009) 41433627-41440717 protein_coding
ENST00000589102 (ATP5SL-010) 41433284-41439910 protein_coding
ENST00000589503 (ATP5SL-005) 41431319-41439537 retained_intron
ENST00000589970 (ATP5SL-008) 41431872-41439908 protein_coding
ENST00000590641 (ATP5SL-003) 41432846-41439576 protein_coding
ENST00000592922 (ATP5SL-001) 41431339-41439936 protein_coding
ENST00000594339 (ATP5SL-014) 41432854-41439537 nonsense_mediated_decay
ENST00000594660 (ATP5SL-012) 41431749-41436439 protein_coding
ENST00000595407 (ATP5SL-015) 41433440-41439896 retained_intron
ENST00000595425 (ATP5SL-016) 41433224-41439908 protein_coding
ENST00000597457 (ATP5SL-013) 41432929-41439905 protein_coding
ENST00000597608 (ATP5SL-011) 41438966-41440692 retained_intron
ENSG00000177191 (B3GNT8)
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 		ENST00000321702 (B3GNT8-001) 41425359-41428730 protein_coding
ENST00000601379 (B3GNT8-003) 41426056-41427362 processed_transcript
ENST00000601616 (B3GNT8-002) 41425411-41427558 processed_transcript
ENSG00000248098 (BCKDHA)
branched chain keto acid dehydrogenase E1, alpha polypeptide 		ENST00000269980 (BCKDHA-001) 41397460-41425005 protein_coding
ENST00000457836 (BCKDHA-002) 41397823-41425001 protein_coding
ENST00000535632 (BCKDHA-008) 41415382-41422761 processed_transcript
ENST00000538423 (BCKDHA-005) 41397808-41422207 retained_intron
ENST00000541315 (BCKDHA-004) 41410722-41422249 protein_coding
ENST00000542943 (BCKDHA-007) 41397820-41423075 protein_coding
ENST00000544905 (BCKDHA-006) 41423109-41425002 protein_coding
ENST00000545787 (BCKDHA-009) 41419023-41422734 retained_intron
ENST00000595085 (BCKDHA-201) 41397789-41431345 protein_coding
ENSG00000255730 (CTC-435M10.3)
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial {ECO:0000313|Ensembl:ENSP00000471150}; Uncharacterized protein {ECO: 		ENST00000540732 (CTC-435M10.3-001) 41376757-41425001 protein_coding
ENST00000604424 (CTC-435M10.3-002) 41350853-41410853 processed_transcript
ENSG00000268987 (CTC-435M10.10)
 ENST00000598988 (CTC-435M10.10-001) 41399372-41400365 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UM_0001ENSDARG00000040555ENSDART00000059347ENSDART00000125820ENSDARG00000040557ENSDART00000059352ENSDART00000145177CIL_0003UM_0002ENSG00000077348ENST00000221233ENST00000593523ENST00000593771ENST00000596905ENST00000602129ENSG00000105341ENST00000221943ENST00000301183ENST00000417807ENST00000438807ENST00000586786ENST00000589102ENST00000589503ENST00000589970ENST00000590641ENST00000592922ENST00000594339ENST00000594660ENST00000595407ENST00000595425ENST00000597457ENST00000597608ENSG00000177191ENST00000321702ENST00000601379ENST00000601616ENSG00000248098ENST00000269980ENST00000457836ENST00000535632ENST00000538423ENST00000541315ENST00000542943ENST00000544905ENST00000545787ENST00000595085ENSG00000255730ENST00000540732ENST00000604424ENSG00000268987ENST00000598988
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UM_0001ENSDARG00000040555ENSDART00000059347ENSDART00000125820ENSDARG00000040557ENSDART00000059352ENSDART00000145177CIL_0003UM_0002ENSG00000077348ENST00000221233ENSG00000105341ENST00000221943ENST00000438807ENST00000589970ENST00000592922ENST00000595407ENSG00000177191ENST00000321702ENST00000601379ENST00000601616ENSG00000248098ENST00000269980ENST00000457836ENST00000541315ENST00000542943ENSG00000255730ENST00000540732ENSG00000268987ENST00000598988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040555 ENSDART00000059347 N/A N/A N/A 22.715±5.42 N/A N/A 39.780±0.55 14.658±0.00 2.252±0.00 N/A 7.500±0.00 N/A N/A N/A
ENSDART00000125820 N/A N/A N/A 6.041±0.00 N/A N/A 149.372±102.77 46.352±32.73 0.761±0.00 N/A 3.637±0.00 N/A N/A N/A
ENSDARG00000040557 ENSDART00000059352 N/A N/A N/A 5.860±1.17 N/A N/A 12.126±4.29 7.346±0.00 2.071±0.00 N/A 4.464±0.00 N/A N/A N/A
ENSDART00000145177 N/A N/A N/A 0.937±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077348 ENST00000221233 N/A 24.107±0.00 N/A 10.787±5.05 N/A N/A N/A N/A N/A N/A 25.718±0.00 23.511±1.64 26.806±0.00 N/A
ENST00000593523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105341 ENST00000221943 11.946±0.00 14.226±0.00 1.824±0.00 N/A 12.174±0.00 14.100±12.63 11.037±7.12 26.482±0.00 8.520±4.55 2.328±0.00 7.376±3.06 14.791±7.80 25.220±2.08 15.673±0.59
ENST00000301183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438807 N/A N/A N/A N/A N/A N/A 15.122±0.00 N/A N/A 8.874±0.00 N/A 15.765±0.00 N/A N/A
ENST00000586786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589970 N/A N/A N/A N/A N/A 2.673±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592922 N/A 13.176±0.00 N/A 10.432±0.00 N/A N/A N/A N/A N/A 8.843±0.00 N/A N/A N/A N/A
ENST00000594339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595407 N/A N/A N/A N/A N/A N/A N/A 7.016±0.00 N/A N/A N/A N/A N/A N/A
ENST00000595425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177191 ENST00000321702 1.680±0.00 1.189±0.00 0.104±0.00 0.150±0.00 0.642±0.60 1.762±0.00 0.546±0.48 1.767±0.00 0.318±0.00 2.083±1.90 0.149±0.00 1.897±0.21 1.353±0.60 0.369±0.18
ENST00000601379 2.481±0.00 N/A N/A N/A 1.232±0.00 1.371±0.00 N/A 1.455±0.00 0.909±0.00 N/A 1.228±1.14 1.419±0.00 1.085±0.20 0.453±0.11
ENST00000601616 N/A N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000248098 ENST00000269980 N/A N/A N/A 4.402±0.00 3.401±0.00 N/A N/A 6.400±0.00 3.515±0.00 2.001±0.00 6.353±0.00 8.552±7.59 N/A 13.844±0.00
ENST00000457836 20.267±0.00 16.867±0.00 N/A 15.539±0.00 18.872±0.00 11.582±10.29 25.705±0.00 38.267±0.00 29.882±0.00 12.505±0.00 32.675±0.00 1.415±0.00 N/A 26.045±4.05
ENST00000535632 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.872±0.00 N/A N/A N/A
ENST00000542943 28.573±0.00 N/A 3.807±0.00 13.671±7.36 27.014±0.00 N/A 15.694±10.51 N/A 24.636±0.00 N/A 16.726±7.49 N/A N/A 36.864±0.00
ENST00000544905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000255730 ENST00000540732 N/A N/A 2.992±0.00 N/A 2.885±0.00 N/A 2.679±0.00 N/A N/A 7.011±4.58 N/A 23.075±0.00 22.568±3.38 N/A
ENST00000604424 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000268987 ENST00000598988 0.027±0.00 0.218±0.00 1.745±0.00 0.056±0.00 N/A 0.062±0.00 0.024±0.00 N/A 0.323±0.00 N/A N/A 0.758±0.29 N/A 0.048±0.00

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