C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003UO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077143-ENSDARG00000015681 CGP 7955 16:12931098-12996004
GeneTranscriptPositionBiotype
ENSDARG00000015681 (gsk3ab)
glycogen synthase kinase 3 alpha b 		ENSDART00000024935 (gsk3ab-001) 12946298-12996003 protein_coding
ENSDART00000111481 (gsk3ab-201) 12946431-12996004 protein_coding
ENSDART00000131997 (gsk3ab-003) 12979514-12987457 retained_intron
ENSDART00000138335 (gsk3ab-002) 12946415-12994738 nonsense_mediated_decay
ENSDARG00000077143 (znf526)
zinc finger protein 526 		ENSDART00000112541 (znf526-201) 12931098-12939427 protein_coding
ENSDART00000134752 (znf526-001) 12931102-12934826 protein_coding
ENSDARG00000092637 (si:dkey-165g20.2)
si:dkey-165g20.2 		ENSDART00000133510 (si:dkey-165g20.2-001) 12938744-12945075 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_0003UO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167625-ENSG00000105723 CGP 9606 19:42220271-42242625
GeneTranscriptPositionBiotype
ENSG00000105723 (GSK3A)
glycogen synthase kinase 3 alpha 		ENST00000222330 (GSK3A-001) 42230186-42242593 protein_coding
ENST00000398249 (GSK3A-002) 42230190-42241893 protein_coding
ENST00000453535 (GSK3A-003) 42230222-42242625 nonsense_mediated_decay
ENST00000493059 (GSK3A-004) 42230542-42232837 retained_intron
ENSG00000167625 (ZNF526)
zinc finger protein 526 		ENST00000301215 (ZNF526-001) 42220271-42228201 protein_coding
ENST00000597945 (ZNF526-003) 42220377-42224609 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003UO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046541-ENSMUSG00000057177 CGP 10090 7:25221451-25237851
GeneTranscriptPositionBiotype
ENSMUSG00000046541 (Zfp526)
zinc finger protein 526 		ENSMUST00000055604 (Zfp526-201) 25221451-25227507 protein_coding
ENSMUSG00000057177 (Gsk3a)
glycogen synthase kinase 3 alpha 		ENSMUST00000071739 (Gsk3a-001) 25228258-25237851 protein_coding
ENSMUST00000108411 (Gsk3a-002) 25228258-25237851 protein_coding
ENSMUSG00000090330 (9130221H12Rik)
RIKEN cDNA 9130221H12 gene 		ENSMUST00000169914 (9130221H12Rik-201) 25228687-25230257 antisense
ENSMUST00000190693 (9130221H12Rik-002) 25228723-25230263 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UO_0001ENSDARG00000015681ENSDART00000024935ENSDART00000111481ENSDART00000131997ENSDART00000138335ENSDARG00000077143ENSDART00000112541ENSDART00000134752ENSDARG00000092637ENSDART00000133510CIL_0003UO_0002ENSG00000105723ENST00000222330ENST00000398249ENST00000453535ENST00000493059ENSG00000167625ENST00000301215ENST00000597945CIL_0003UO_0003ENSMUSG00000046541ENSMUST00000055604ENSMUSG00000057177ENSMUST00000071739ENSMUST00000108411ENSMUSG00000090330ENSMUST00000169914ENSMUST00000190693
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UO_0001ENSDARG00000015681ENSDART00000024935ENSDART00000111481ENSDART00000131997ENSDART00000138335ENSDARG00000077143ENSDART00000112541ENSDART00000134752ENSDARG00000092637ENSDART00000133510CIL_0003UO_0002ENSG00000105723ENST00000222330ENST00000398249ENST00000453535ENST00000493059ENSG00000167625ENST00000301215CIL_0003UO_0003ENSMUSG00000046541ENSMUST00000055604ENSMUSG00000057177ENSMUST00000071739ENSMUST00000108411ENSMUSG00000090330ENSMUST00000169914ENSMUST00000190693
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015681 ENSDART00000024935 N/A N/A N/A 28.113±4.61 N/A N/A 12.556±2.19 8.153±7.93 1.862±0.00 N/A 8.620±0.00 N/A N/A N/A
ENSDART00000111481 N/A N/A N/A 11.671±0.00 N/A N/A 0.888±0.60 N/A 0.826±0.00 N/A 1.564±0.00 N/A N/A N/A
ENSDART00000131997 N/A N/A N/A N/A N/A N/A 0.379±0.00 8.821±3.19 N/A N/A N/A N/A N/A N/A
ENSDART00000138335 N/A N/A N/A N/A N/A N/A 17.410±0.00 N/A 2.293±0.00 N/A N/A N/A N/A N/A
ENSDARG00000077143 ENSDART00000112541 N/A N/A N/A 2.178±0.00 N/A N/A 0.769±0.02 2.897±0.00 0.236±0.00 N/A N/A N/A N/A N/A
ENSDART00000134752 N/A N/A N/A 3.864±1.66 N/A N/A 0.883±0.54 0.816±0.38 N/A N/A N/A N/A N/A N/A
ENSDARG00000092637 ENSDART00000133510 N/A N/A N/A N/A N/A N/A 0.628±0.00 N/A N/A N/A 0.217±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105723 ENST00000222330 10.365±0.00 12.020±0.00 1.505±0.00 23.960±17.76 11.947±0.00 10.956±8.28 4.335±3.28 6.753±5.38 4.730±3.21 9.587±9.18 10.982±9.94 16.996±6.99 24.114±5.59 18.333±11.21
ENST00000398249 N/A N/A N/A N/A 0.368±0.00 0.600±0.00 0.238±0.00 0.314±0.00 N/A N/A N/A 0.361±0.00 N/A N/A
ENST00000453535 7.884±0.00 9.156±0.00 N/A 18.156±0.00 6.201±4.65 10.400±0.00 15.088±0.00 23.879±0.00 9.220±0.00 12.586±11.35 16.927±15.63 9.117±7.78 15.933±2.18 13.655±3.20
ENST00000493059 N/A N/A 2.363±0.00 N/A N/A N/A 1.175±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000167625 ENST00000301215 1.493±0.00 1.830±0.00 0.292±0.00 0.586±0.32 1.295±0.28 1.898±0.77 0.468±0.37 1.185±0.73 0.909±0.10 1.019±0.00 1.739±1.32 2.389±1.57 2.774±0.17 3.277±0.05
ENST00000597945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046541 ENSMUST00000055604 3.806±0.65 5.904±0.58 3.888±0.22 2.867±0.25 5.944±1.45 4.203±1.07 2.394±0.25 3.487±0.50 2.683±1.73 5.371±1.96 1.529±0.17 6.603±1.84 4.329±1.62 11.365±1.89
ENSMUSG00000057177 ENSMUST00000071739 20.522±3.35 24.335±4.30 26.705±1.69 52.086±14.54 22.697±4.50 29.326±4.39 18.318±0.73 22.835±1.18 20.604±7.29 18.208±2.69 32.154±1.63 28.926±6.09 24.873±9.26 20.913±0.64
ENSMUST00000108411 4.422±0.81 N/A N/A N/A N/A 4.780±0.00 N/A N/A N/A N/A N/A 5.339±0.00 6.407±0.00 3.042±0.00
ENSMUSG00000090330 ENSMUST00000169914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.040±0.00
ENSMUST00000190693 16.913±4.02 47.877±3.41 7.338±0.00 9.378±0.00 29.311±5.00 26.325±7.28 13.160±1.97 20.688±1.97 10.633±3.98 24.346±0.97 6.661±0.60 25.571±8.29 10.146±5.14 12.970±4.47

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