C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003US_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101109-ENSG00000124134 CGP 9606 20:44966474-45101112
GeneTranscriptPositionBiotype
ENSG00000124134 (KCNS1)
potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
ENST00000306117 (KCNS1-001) 45092310-45101112 protein_coding
ENST00000537075 (KCNS1-201) 45094365-45100967 protein_coding
ENSG00000252021 (Y_RNA)
Y RNA
ENST00000516212 (Y_RNA.1-871) 45004348-45004454 misc_RNA
CIL_0003US_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018209-ENSMUSG00000040164 CGP 10090 2:164070322-164171113
GeneTranscriptPositionBiotype
ENSMUSG00000018209 (Stk4)
serine/threonine kinase 4
ENSMUST00000018353 (Stk4-001) 164074138-164155524 protein_coding
ENSMUST00000088291 (Stk4-003) 164110201-164155524 protein_coding
ENSMUST00000134078 (Stk4-004) 164070322-164086591 protein_coding
ENSMUST00000137866 (Stk4-002) 164099720-164118369 protein_coding
ENSMUST00000153319 (Stk4-005) 164081597-164096857 processed_transcript
ENSMUSG00000018322 (Tomm34)
translocase of outer mitochondrial membrane 34
ENSMUST00000018466 (Tomm34-002) 164053540-164071102 protein_coding
ENSMUST00000109384 (Tomm34-001) 164053540-164071169 protein_coding
ENSMUST00000132602 (Tomm34-003) 164053540-164065715 retained_intron
ENSMUSG00000040164 (Kcns1)
K+ voltage-gated channel, subfamily S, 1
ENSMUST00000045196 (Kcns1-001) 164163619-164171113 protein_coding
ENSMUSG00000084446 (n-R5s207)
nuclear encoded rRNA 5S 207
ENSMUST00000122497 (n-R5s207-201) 164157404-164157521 rRNA
ENSMUSG00000085538 (Gm11455)
predicted gene 11455
ENSMUST00000149285 (Gm11455-001) 164135703-164140419 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003US_0001ENSG00000124134ENST00000306117ENST00000537075ENSG00000252021ENST00000516212CIL_0003US_0002ENSMUSG00000018209ENSMUST00000018353ENSMUST00000088291ENSMUST00000134078ENSMUST00000137866ENSMUST00000153319ENSMUSG00000018322ENSMUST00000018466ENSMUST00000109384ENSMUST00000132602ENSMUSG00000040164ENSMUST00000045196ENSMUSG00000084446ENSMUST00000122497ENSMUSG00000085538ENSMUST00000149285
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003US_0001ENSG00000124134ENST00000306117ENST00000537075ENSG00000252021ENST00000516212CIL_0003US_0002ENSMUSG00000018209ENSMUST00000018353ENSMUST00000088291ENSMUST00000137866ENSMUSG00000018322ENSMUST00000018466ENSMUST00000109384ENSMUST00000132602ENSMUSG00000040164ENSMUST00000045196ENSMUSG00000084446ENSMUST00000122497ENSMUSG00000085538ENSMUST00000149285
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124134 ENST00000306117 N/A N/A 0.026±0.00 N/A N/A 0.032±0.00 N/A N/A 0.096±0.00 0.011±0.00 N/A 0.041±0.03 0.090±0.00 N/A
ENST00000537075 N/A N/A N/A N/A N/A 0.082±0.00 0.050±0.00 0.180±0.00 N/A 0.195±0.00 N/A 0.015±0.00 0.035±0.00 N/A
ENSG00000252021 ENST00000516212 N/A 0.839±0.00 N/A 27.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018209 ENSMUST00000018353 3.374±0.80 1.106±0.34 6.259±0.09 7.650±1.23 8.065±1.31 4.217±0.99 2.328±0.25 3.923±0.95 5.463±2.71 12.225±2.50 2.171±0.40 4.952±2.44 14.160±3.68 5.445±0.18
ENSMUST00000088291 3.633±1.01 6.684±0.56 1.524±0.40 1.573±0.00 9.028±3.29 5.133±1.28 0.975±0.33 2.544±0.79 1.582±0.34 7.003±0.46 0.440±0.09 5.533±1.70 N/A 2.793±1.06
ENSMUST00000134078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137866 N/A N/A N/A 13.832±0.00 N/A N/A N/A N/A N/A N/A N/A 19.401±0.00 37.014±8.29 20.162±0.00
ENSMUST00000153319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018322 ENSMUST00000018466 4.318±0.79 6.188±1.24 4.092±0.58 3.147±0.83 5.944±1.57 4.770±0.67 1.200±0.15 1.866±0.46 1.268±0.40 5.797±0.77 0.991±0.29 5.294±1.51 1.986±0.30 6.617±2.24
ENSMUST00000109384 18.478±0.52 36.982±1.85 14.904±0.16 10.955±3.63 21.146±5.19 11.539±5.63 10.147±2.58 14.223±1.25 6.584±3.21 15.439±5.24 4.069±0.58 22.527±8.29 12.210±3.56 14.463±4.83
ENSMUST00000132602 N/A N/A N/A 1.125±0.00 1.708±0.00 N/A N/A N/A N/A N/A N/A 3.007±0.00 N/A N/A
ENSMUSG00000040164 ENSMUST00000045196 0.080±0.01 N/A 0.010±0.00 0.565±0.23 0.133±0.05 0.856±0.23 0.068±0.03 0.207±0.07 0.017±0.01 0.063±0.03 0.051±0.03 0.111±0.06 0.115±0.09 0.013±0.00
ENSMUSG00000084446 ENSMUST00000122497 N/A N/A 20.215±0.00 12.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085538 ENSMUST00000149285 0.142±0.10 0.155±0.01 0.050±0.02 0.088±0.03 0.336±0.26 0.132±0.00 N/A 0.060±0.00 0.088±0.04 0.249±0.04 N/A 0.351±0.33 0.092±0.03 0.099±0.04

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