C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003WF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179954-ENSG00000187550 CGP 9606 19:55488404-55537089
GeneTranscriptPositionBiotype
ENSG00000179954 (SSC5D)
scavenger receptor cysteine rich family, 5 domains 		ENST00000389623 (SSC5D-001) 55488567-55519098 protein_coding
ENST00000587166 (SSC5D-003) 55488567-55504324 protein_coding
ENST00000588254 (SSC5D-002) 55488497-55492856 retained_intron
ENST00000589020 (SSC5D-004) 55493891-55499973 protein_coding
ENST00000594321 (SSC5D-005) 55488404-55489572 protein_coding
ENST00000615233 (SSC5D-201) 55488567-55504324 protein_coding
ENSG00000187550 (SBK2)
SH3 domain binding kinase family, member 2 		ENST00000344158 (SBK2-201) 55529733-55536303 protein_coding
ENST00000413299 (SBK2-001) 55529733-55537089 protein_coding
CIL_0003WF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035279-ENSMUSG00000030433 CGP 10090 7:4925844-4964390
GeneTranscriptPositionBiotype
ENSMUSG00000030433 (Sbk2)
SH3-binding domain kinase family, member 2 		ENSMUST00000032598 (Sbk2-201) 4957081-4964348 protein_coding
ENSMUST00000182214 (Sbk2-001) 4956134-4964345 protein_coding
ENSMUST00000182837 (Sbk2-003) 4961070-4964390 processed_transcript
ENSMUST00000183170 (Sbk2-002) 4957522-4964354 protein_coding
ENSMUSG00000035279 (Ssc5d)
scavenger receptor cysteine rich family, 5 domains 		ENSMUST00000057612 (Ssc5d-201) 4925844-4944821 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WF_0001ENSG00000179954ENST00000389623ENST00000587166ENST00000588254ENST00000589020ENST00000594321ENST00000615233ENSG00000187550ENST00000344158ENST00000413299CIL_0003WF_0002ENSMUSG00000030433ENSMUST00000032598ENSMUST00000182214ENSMUST00000182837ENSMUST00000183170ENSMUSG00000035279ENSMUST00000057612
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WF_0001ENSG00000179954ENST00000389623ENST00000587166ENST00000588254ENSG00000187550ENST00000344158ENST00000413299CIL_0003WF_0002ENSMUSG00000030433ENSMUST00000032598ENSMUST00000182214ENSMUST00000182837ENSMUST00000183170ENSMUSG00000035279ENSMUST00000057612
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179954 ENST00000389623 3.024±0.00 2.330±0.00 0.263±0.00 0.573±0.51 4.978±4.11 7.222±6.83 0.655±0.62 1.065±0.97 0.693±0.46 3.801±2.97 0.739±0.00 8.879±9.59 3.039±1.01 6.598±3.72
ENST00000587166 N/A N/A N/A 0.068±0.00 0.823±0.00 0.864±0.00 0.256±0.00 N/A 1.512±0.00 0.200±0.00 0.607±0.00 0.392±0.00 N/A N/A
ENST00000588254 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A 0.074±0.00 N/A N/A N/A N/A N/A
ENST00000589020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615233 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187550 ENST00000344158 0.262±0.00 N/A N/A N/A 1.063±0.00 0.104±0.00 0.120±0.00 0.059±0.00 0.099±0.00 N/A 0.133±0.00 0.213±0.00 0.100±0.00 0.759±0.52
ENST00000413299 N/A N/A N/A N/A N/A N/A 2.507±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030433 ENSMUST00000032598 N/A 0.329±0.05 0.015±0.00 N/A N/A 0.042±0.00 N/A N/A 0.042±0.02 N/A 13.541±1.27 0.135±0.08 0.391±0.23 0.094±0.00
ENSMUST00000182214 N/A 0.125±0.08 0.020±0.00 0.037±0.03 22.925±13.41 0.042±0.01 22.876±6.80 0.319±0.23 0.008±0.00 3.723±3.21 36.160±8.59 0.362±0.11 0.141±0.02 0.044±0.01
ENSMUST00000182837 N/A N/A 0.079±0.00 0.057±0.03 N/A N/A N/A N/A 0.029±0.00 N/A N/A 0.321±0.00 1.067±0.00 N/A
ENSMUST00000183170 0.080±0.00 0.130±0.00 N/A N/A N/A 0.093±0.01 N/A N/A 0.039±0.00 N/A N/A 0.401±0.11 0.955±0.00 N/A
ENSMUSG00000035279 ENSMUST00000057612 2.821±0.66 0.503±0.18 3.426±0.09 0.494±0.21 4.581±1.94 3.660±0.87 1.291±0.37 0.290±0.14 0.098±0.05 1.323±0.83 1.781±0.57 2.759±1.22 0.624±0.32 0.309±0.13

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