C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003WH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000007791-ENSDARG00000079618 CGP 7955 5:59122333-59228346
GeneTranscriptPositionBiotype
ENSDARG00000007791 (ppp2r1a)
protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform
ENSDART00000097389 (ppp2r1a-201) 59122336-59147200 protein_coding
ENSDART00000135344 (ppp2r1a-001) 59122333-59147207 protein_coding
ENSDARG00000079618 (sik2a)
salt-inducible kinase 2a
ENSDART00000089961 (sik2a-201) 59163274-59169984 protein_coding
ENSDART00000144592 (sik2a-002) 59191463-59228346 processed_transcript
ENSDART00000145959 (sik2a-001) 59163549-59228249 protein_coding
CIL_0003WH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000032430-ENSDARG00000062315 CGP 7955 15:20706322-20798849
GeneTranscriptPositionBiotype
ENSDARG00000032430 (ppp2r1b)
protein phosphatase 2 (formerly 2A), regulatory subunit A, beta isoform
ENSDART00000016860 (ppp2r1b-001) 20706322-20734481 protein_coding
ENSDART00000135541 (ppp2r1b-002) 20729166-20731651 processed_transcript
ENSDARG00000062315 (sik2b)
salt-inducible kinase 2b
ENSDART00000089953 (sik2b-001) 20743407-20798849 protein_coding
ENSDART00000153624 (sik2b-002) 20766756-20775090 retained_intron
ENSDARG00000096853 (si:dkey-103g5.7)
si:dkey-103g5.7
ENSDART00000155854 (si:dkey-103g5.7-001) 20742643-20804948 antisense
ENSDART00000156962 (si:dkey-103g5.7-002) 20742406-20783272 antisense
CIL_0003WH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032058-ENSMUSG00000037112 CGP 10090 9:50845301-51009073
GeneTranscriptPositionBiotype
ENSMUSG00000037112 (Sik2)
salt inducible kinase 2
ENSMUST00000041375 (Sik2-001) 50892801-51009073 protein_coding
ENSMUST00000068484 (Sik2-004) 50928264-51009026 processed_transcript
ENSMUST00000176327 (Sik2-008) 50995584-51009011 retained_intron
ENSMUST00000176491 (Sik2-002) 50892801-51008973 nonsense_mediated_decay
ENSMUST00000176663 (Sik2-007) 50892801-51008936 protein_coding
ENSMUST00000176824 (Sik2-006) 50892801-51008936 protein_coding
ENSMUST00000177203 (Sik2-003) 50930562-51008984 processed_transcript
ENSMUST00000177346 (Sik2-005) 50933836-51009000 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WH_0001ENSDARG00000007791ENSDART00000097389ENSDART00000135344ENSDARG00000079618ENSDART00000089961ENSDART00000144592ENSDART00000145959CIL_0003WH_0002ENSDARG00000032430ENSDART00000016860ENSDART00000135541ENSDARG00000062315ENSDART00000089953ENSDART00000153624ENSDARG00000096853ENSDART00000155854ENSDART00000156962CIL_0003WH_0003ENSMUSG00000037112ENSMUST00000041375ENSMUST00000068484ENSMUST00000176327ENSMUST00000176491ENSMUST00000176663ENSMUST00000176824ENSMUST00000177203ENSMUST00000177346
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WH_0001ENSDARG00000007791ENSDART00000097389ENSDART00000135344ENSDARG00000079618ENSDART00000089961ENSDART00000144592ENSDART00000145959CIL_0003WH_0002ENSDARG00000032430ENSDART00000016860ENSDARG00000062315ENSDART00000089953ENSDARG00000096853ENSDART00000155854CIL_0003WH_0003ENSMUSG00000037112ENSMUST00000041375ENSMUST00000068484ENSMUST00000176327ENSMUST00000176491ENSMUST00000176663ENSMUST00000176824
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007791 ENSDART00000097389 N/A N/A N/A 47.802±15.91 N/A N/A 1.515±0.91 3.509±1.78 0.814±0.00 N/A N/A N/A N/A N/A
ENSDART00000135344 N/A N/A N/A 144.600±43.08 N/A N/A 38.560±9.16 20.767±0.00 5.031±0.00 N/A 23.214±0.00 N/A N/A N/A
ENSDARG00000079618 ENSDART00000089961 N/A N/A N/A N/A N/A N/A 0.417±0.23 0.319±0.00 0.014±0.00 N/A 0.110±0.00 N/A N/A N/A
ENSDART00000144592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A
ENSDART00000145959 N/A N/A N/A N/A N/A N/A 0.231±0.06 0.148±0.00 0.058±0.00 N/A 0.119±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000032430 ENSDART00000016860 N/A N/A N/A 81.048±13.42 N/A N/A 19.443±2.88 20.714±7.21 2.327±0.00 N/A 28.639±0.00 N/A N/A N/A
ENSDART00000135541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062315 ENSDART00000089953 N/A N/A N/A 23.843±10.50 N/A N/A 6.980±2.18 5.873±1.56 4.247±0.00 N/A 10.074±0.00 N/A N/A N/A
ENSDART00000153624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096853 ENSDART00000155854 N/A N/A N/A 0.553±0.00 N/A N/A 1.097±0.05 1.009±0.50 N/A N/A 0.304±0.00 N/A N/A N/A
ENSDART00000156962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037112 ENSMUST00000041375 22.899±15.05 11.809±2.41 N/A N/A 15.844±4.68 4.429±1.33 1.930±0.87 3.785±0.70 1.552±0.41 3.862±0.50 N/A 6.685±2.36 N/A 7.061±0.60
ENSMUST00000068484 N/A 70.190±26.09 N/A N/A 83.482±0.00 N/A N/A N/A N/A N/A N/A 31.621±3.78 N/A N/A
ENSMUST00000176327 N/A 79.025±8.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176491 N/A N/A N/A N/A N/A N/A 1.216±0.00 N/A N/A N/A N/A N/A N/A 8.396±0.62
ENSMUST00000176663 26.581±9.81 7.263±2.74 3.351±0.12 3.886±1.04 15.187±0.00 3.739±0.40 1.724±0.32 N/A 2.581±1.62 4.389±0.00 3.324±0.00 4.860±1.85 2.315±0.43 N/A
ENSMUST00000176824 13.429±4.69 5.729±0.69 2.625±0.44 1.767±0.13 9.069±0.21 2.138±0.17 1.032±0.19 2.260±0.47 N/A N/A N/A 3.490±0.79 1.122±0.00 N/A
ENSMUST00000177203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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