C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003WI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062315-ENSDARG00000056835 CGP 7955 15:20743407-20814607
GeneTranscriptPositionBiotype
ENSDARG00000056835 (laynb)
layilin b 		ENSDART00000079399 (laynb-201) 20808301-20814467 protein_coding
ENSDART00000153581 (laynb-001) 20804280-20814605 protein_coding
ENSDART00000154548 (laynb-002) 20808412-20813624 protein_coding
ENSDART00000155588 (laynb-003) 20808770-20814607 protein_coding
ENSDARG00000062315 (sik2b)
salt-inducible kinase 2b 		ENSDART00000089953 (sik2b-001) 20743407-20798849 protein_coding
ENSDART00000153624 (sik2b-002) 20766756-20775090 retained_intron
ENSDARG00000096853 (si:dkey-103g5.7)
si:dkey-103g5.7 		ENSDART00000155854 (si:dkey-103g5.7-001) 20742643-20804948 antisense
ENSDART00000156962 (si:dkey-103g5.7-002) 20742406-20783272 antisense

Danio rerio Ensembl (Zv9)

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CIL_0003WI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079618-ENSDARG00000035169 CGP 7955 5:59163274-59247119
GeneTranscriptPositionBiotype
ENSDARG00000035169 (layna)
layilin a 		ENSDART00000050945 (layna-001) 59235160-59247119 protein_coding
ENSDARG00000079618 (sik2a)
salt-inducible kinase 2a 		ENSDART00000089961 (sik2a-201) 59163274-59169984 protein_coding
ENSDART00000144592 (sik2a-002) 59191463-59228346 processed_transcript
ENSDART00000145959 (sik2a-001) 59163549-59228249 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003WI_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037112-ENSMUSG00000060594 CGP 10090 9:50892801-51077094
GeneTranscriptPositionBiotype
ENSMUSG00000037112 (Sik2)
salt inducible kinase 2 		ENSMUST00000041375 (Sik2-001) 50892801-51009073 protein_coding
ENSMUST00000068484 (Sik2-004) 50928264-51009026 processed_transcript
ENSMUST00000176327 (Sik2-008) 50995584-51009011 retained_intron
ENSMUST00000176491 (Sik2-002) 50892801-51008973 nonsense_mediated_decay
ENSMUST00000176663 (Sik2-007) 50892801-51008936 protein_coding
ENSMUST00000176824 (Sik2-006) 50892801-51008936 protein_coding
ENSMUST00000177203 (Sik2-003) 50930562-51008984 processed_transcript
ENSMUST00000177346 (Sik2-005) 50933836-51009000 retained_intron
ENSMUSG00000060594 (Layn)
layilin 		ENSMUST00000098782 (Layn-201) 51056780-51077094 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WI_0001ENSDARG00000056835ENSDART00000079399ENSDART00000153581ENSDART00000154548ENSDART00000155588ENSDARG00000062315ENSDART00000089953ENSDART00000153624ENSDARG00000096853ENSDART00000155854ENSDART00000156962CIL_0003WI_0002ENSDARG00000035169ENSDART00000050945ENSDARG00000079618ENSDART00000089961ENSDART00000144592ENSDART00000145959CIL_0003WI_0003ENSMUSG00000037112ENSMUST00000041375ENSMUST00000068484ENSMUST00000176327ENSMUST00000176491ENSMUST00000176663ENSMUST00000176824ENSMUST00000177203ENSMUST00000177346ENSMUSG00000060594ENSMUST00000098782
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003WI_0001ENSDARG00000056835ENSDART00000079399ENSDART00000153581ENSDART00000155588ENSDARG00000062315ENSDART00000089953ENSDARG00000096853ENSDART00000155854CIL_0003WI_0002ENSDARG00000035169ENSDART00000050945ENSDARG00000079618ENSDART00000089961ENSDART00000144592ENSDART00000145959CIL_0003WI_0003ENSMUSG00000037112ENSMUST00000041375ENSMUST00000068484ENSMUST00000176327ENSMUST00000176491ENSMUST00000176663ENSMUST00000176824ENSMUSG00000060594ENSMUST00000098782
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056835 ENSDART00000079399 N/A N/A N/A 0.399±0.00 N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A
ENSDART00000153581 N/A N/A N/A N/A N/A N/A N/A N/A 0.150±0.00 N/A 0.109±0.00 N/A N/A N/A
ENSDART00000154548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000155588 N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A
ENSDARG00000062315 ENSDART00000089953 N/A N/A N/A 23.843±10.50 N/A N/A 6.980±2.18 5.873±1.56 4.247±0.00 N/A 10.074±0.00 N/A N/A N/A
ENSDART00000153624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000096853 ENSDART00000155854 N/A N/A N/A 0.553±0.00 N/A N/A 1.097±0.05 1.009±0.50 N/A N/A 0.304±0.00 N/A N/A N/A
ENSDART00000156962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035169 ENSDART00000050945 N/A N/A N/A 0.823±0.28 N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000079618 ENSDART00000089961 N/A N/A N/A N/A N/A N/A 0.417±0.23 0.319±0.00 0.014±0.00 N/A 0.110±0.00 N/A N/A N/A
ENSDART00000144592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.233±0.00 N/A N/A N/A
ENSDART00000145959 N/A N/A N/A N/A N/A N/A 0.231±0.06 0.148±0.00 0.058±0.00 N/A 0.119±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037112 ENSMUST00000041375 22.899±15.05 11.809±2.41 N/A N/A 15.844±4.68 4.429±1.33 1.930±0.87 3.785±0.70 1.552±0.41 3.862±0.50 N/A 6.685±2.36 N/A 7.061±0.60
ENSMUST00000068484 N/A 70.190±26.09 N/A N/A 83.482±0.00 N/A N/A N/A N/A N/A N/A 31.621±3.78 N/A N/A
ENSMUST00000176327 N/A 79.025±8.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176491 N/A N/A N/A N/A N/A N/A 1.216±0.00 N/A N/A N/A N/A N/A N/A 8.396±0.62
ENSMUST00000176663 26.581±9.81 7.263±2.74 3.351±0.12 3.886±1.04 15.187±0.00 3.739±0.40 1.724±0.32 N/A 2.581±1.62 4.389±0.00 3.324±0.00 4.860±1.85 2.315±0.43 N/A
ENSMUST00000176824 13.429±4.69 5.729±0.69 2.625±0.44 1.767±0.13 9.069±0.21 2.138±0.17 1.032±0.19 2.260±0.47 N/A N/A N/A 3.490±0.79 1.122±0.00 N/A
ENSMUST00000177203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177346 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060594 ENSMUST00000098782 1.251±0.57 1.009±0.20 1.714±0.05 1.276±1.09 0.973±0.47 0.492±0.22 0.529±0.25 0.454±0.14 0.167±0.06 1.875±0.27 0.241±0.07 4.100±3.09 1.264±0.90 0.657±0.42

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