C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003YQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076858-ENSDARG00000061419 CGP 7955 10:20290436-20373046
GeneTranscriptPositionBiotype
ENSDARG00000061419 (zmat4b)
zinc finger, matrin type 4b 		ENSDART00000098600 (zmat4b-201) 20310725-20366262 protein_coding
ENSDART00000144378 (zmat4b-001) 20304764-20373046 protein_coding
ENSDARG00000076858 (C10H8orf4 (1 of 2))
chromosome 8 open reading frame 4 		ENSDART00000111097 (C10H8orf4 (1 of 2)-201) 20290436-20290756 protein_coding
CIL_0003YQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176907-ENSG00000165061 CGP 9606 8:40153455-40897833
GeneTranscriptPositionBiotype
ENSG00000165061 (ZMAT4)
zinc finger, matrin-type 4 		ENST00000297737 (ZMAT4-002) 40530594-40897825 protein_coding
ENST00000315769 (ZMAT4-001) 40530590-40897833 protein_coding
ENST00000518242 (ZMAT4-008) 40696996-40786782 retained_intron
ENST00000519406 (ZMAT4-003) 40581204-40888545 protein_coding
ENST00000519806 (ZMAT4-009) 40674364-40697337 retained_intron
ENST00000522623 (ZMAT4-006) 40767646-40897807 nonsense_mediated_decay
ENST00000523188 (ZMAT4-007) 40697270-40897824 nonsense_mediated_decay
ENST00000523542 (ZMAT4-005) 40697274-40897810 nonsense_mediated_decay
ENST00000523823 (ZMAT4-004) 40808523-40884944 processed_transcript
ENSG00000176907 (C8orf4)
chromosome 8 open reading frame 4 		ENST00000315792 (C8orf4-001) 40153455-40155308 protein_coding
ENSG00000253354 (CTA-392C11.2)
 ENST00000518722 (CTA-392C11.2-001) 40370028-40401848 lincRNA
ENSG00000253802 (CTA-392C11.1)
 ENST00000521030 (CTA-392C11.1-001) 40333173-40343363 lincRNA
ENST00000521363 (CTA-392C11.1-003) 40298741-40311261 lincRNA
ENST00000522486 (CTA-392C11.1-002) 40299075-40343402 lincRNA
ENSG00000254143 (RP11-470M17.2)
 ENST00000520487 (RP11-470M17.2-001) 40161458-40172612 lincRNA
ENSG00000272479 (RP11-301G7.1)
 ENST00000606398 (RP11-301G7.1-001) 40519565-40520158 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YQ_0001ENSDARG00000061419ENSDART00000098600ENSDART00000144378ENSDARG00000076858ENSDART00000111097CIL_0003YQ_0002ENSG00000165061ENST00000297737ENST00000315769ENST00000518242ENST00000519406ENST00000519806ENST00000522623ENST00000523188ENST00000523542ENST00000523823ENSG00000176907ENST00000315792ENSG00000253354ENST00000518722ENSG00000253802ENST00000521030ENST00000521363ENST00000522486ENSG00000254143ENST00000520487ENSG00000272479ENST00000606398
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003YQ_0001ENSDARG00000061419ENSDART00000098600ENSDART00000144378ENSDARG00000076858ENSDART00000111097CIL_0003YQ_0002ENSG00000165061ENST00000297737ENST00000315769ENST00000519406ENST00000519806ENSG00000176907ENST00000315792ENSG00000253354ENST00000518722ENSG00000253802ENST00000521030ENST00000521363ENST00000522486ENSG00000254143ENST00000520487ENSG00000272479ENST00000606398
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061419 ENSDART00000098600 N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144378 N/A N/A N/A 0.794±0.28 N/A N/A 0.123±0.00 0.810±0.00 N/A N/A 0.168±0.00 N/A N/A N/A
ENSDARG00000076858 ENSDART00000111097 N/A N/A N/A 14.838±12.48 N/A N/A 81.455±50.08 149.264±0.00 0.752±0.00 N/A 27.924±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165061 ENST00000297737 N/A N/A N/A 5.281±2.92 N/A N/A 0.342±0.00 N/A N/A N/A N/A 0.309±0.00 0.063±0.00 0.603±0.00
ENST00000315769 0.039±0.00 0.045±0.00 0.121±0.00 N/A 0.033±0.00 N/A 0.056±0.00 0.050±0.00 0.005±0.00 0.061±0.00 N/A N/A 0.202±0.00 N/A
ENST00000518242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519406 N/A N/A 0.261±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519806 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A
ENST00000522623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176907 ENST00000315792 24.790±0.00 5.470±0.00 9.130±0.00 1.839±0.55 8.846±3.21 10.791±9.37 4.911±0.00 26.755±20.04 10.609±4.16 78.570±44.99 8.937±6.27 34.140±38.65 51.620±20.47 7.602±2.66
ENSG00000253354 ENST00000518722 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.192±0.04
ENSG00000253802 ENST00000521030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.756±0.18
ENST00000521363 N/A N/A N/A N/A N/A N/A N/A 0.888±0.00 N/A N/A N/A N/A N/A 0.138±0.00
ENST00000522486 N/A N/A N/A N/A N/A N/A 0.036±0.00 1.345±0.00 N/A N/A N/A N/A N/A 0.165±0.00
ENSG00000254143 ENST00000520487 N/A N/A N/A N/A N/A 0.121±0.00 N/A 0.157±0.00 N/A 0.857±0.00 N/A 0.073±0.00 0.296±0.13 0.548±0.00
ENSG00000272479 ENST00000606398 N/A 0.065±0.00 N/A 1.551±1.15 0.136±0.00 N/A 0.047±0.00 0.016±0.00 0.014±0.00 0.093±0.00 N/A N/A N/A 0.096±0.02

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