C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000006210-ENSG00000102970 CGP 9606 16:57372458-57416062
GeneTranscriptPositionBiotype
ENSG00000006210 (CX3CL1)
chemokine (C-X3-C motif) ligand 1 		ENST00000006053 (CX3CL1-001) 57372458-57385048 protein_coding
ENST00000563383 (CX3CL1-002) 57372477-57385041 protein_coding
ENST00000564948 (CX3CL1-004) 57372525-57382478 protein_coding
ENST00000565912 (CX3CL1-003) 57376972-57385042 protein_coding
CIL_0003ZE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031778-ENSMUSG00000031780 CGP 10090 8:94772009-94812035
GeneTranscriptPositionBiotype
ENSMUSG00000031778 (Cx3cl1)
chemokine (C-X3-C motif) ligand 1 		ENSMUST00000034230 (Cx3cl1-001) 94772009-94782423 protein_coding
ENSMUST00000135970 (Cx3cl1-004) 94772204-94779638 nonsense_mediated_decay
ENSMUST00000150307 (Cx3cl1-003) 94772225-94780022 nonsense_mediated_decay
ENSMUST00000151783 (Cx3cl1-002) 94772009-94778945 processed_transcript
ENSMUSG00000031780 (Ccl17)
chemokine (C-C motif) ligand 17 		ENSMUST00000034232 (Ccl17-201) 94810453-94812035 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZE_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912CIL_0003ZE_0002ENSMUSG00000031778ENSMUST00000034230ENSMUST00000135970ENSMUST00000150307ENSMUST00000151783ENSMUSG00000031780ENSMUST00000034232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZE_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912CIL_0003ZE_0002ENSMUSG00000031778ENSMUST00000034230ENSMUSG00000031780ENSMUST00000034232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006210 ENST00000006053 28.439±0.00 13.808±0.00 2.712±0.00 17.926±8.15 20.204±17.71 4.009±3.79 5.042±4.04 8.567±7.58 2.632±0.77 133.925±130.31 7.964±6.41 5.039±2.89 5.559±5.21 12.686±11.63
ENST00000563383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.872±0.00 N/A 0.379±0.00
ENST00000564948 N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565912 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.491±0.00 N/A 0.587±0.00 N/A N/A 0.097±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031778 ENSMUST00000034230 4.305±1.14 33.599±2.51 10.458±0.67 32.420±34.86 12.753±3.88 37.370±4.26 3.191±0.77 44.502±3.90 0.293±0.14 25.412±6.20 0.541±0.10 11.118±3.48 2.636±2.20 1.390±0.66
ENSMUST00000135970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031780 ENSMUST00000034232 0.447±0.26 0.431±0.20 1.132±0.17 1.173±0.99 1.091±0.44 0.475±0.29 0.187±0.11 0.437±0.26 0.169±0.09 4.877±1.65 0.179±0.08 0.643±0.22 0.303±0.19 1.002±0.41

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