C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102962-ENSG00000006210 CGP 9606 16:57358772-57385048
GeneTranscriptPositionBiotype
ENSG00000006210 (CX3CL1)
chemokine (C-X3-C motif) ligand 1 		ENST00000006053 (CX3CL1-001) 57372458-57385048 protein_coding
ENST00000563383 (CX3CL1-002) 57372477-57385041 protein_coding
ENST00000564948 (CX3CL1-004) 57372525-57382478 protein_coding
ENST00000565912 (CX3CL1-003) 57376972-57385042 protein_coding
ENSG00000102962 (CCL22)
chemokine (C-C motif) ligand 22 		ENST00000219235 (CCL22-001) 57358772-57366190 protein_coding
CIL_0003ZH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031779-ENSMUSG00000031778 CGP 10090 8:94745590-94782423
GeneTranscriptPositionBiotype
ENSMUSG00000031778 (Cx3cl1)
chemokine (C-X3-C motif) ligand 1 		ENSMUST00000034230 (Cx3cl1-001) 94772009-94782423 protein_coding
ENSMUST00000135970 (Cx3cl1-004) 94772204-94779638 nonsense_mediated_decay
ENSMUST00000150307 (Cx3cl1-003) 94772225-94780022 nonsense_mediated_decay
ENSMUST00000151783 (Cx3cl1-002) 94772009-94778945 processed_transcript
ENSMUSG00000031779 (Ccl22)
chemokine (C-C motif) ligand 22 		ENSMUST00000034231 (Ccl22-001) 94745590-94751699 protein_coding
ENSMUST00000156137 (Ccl22-002) 94745680-94749873 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZH_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912ENSG00000102962ENST00000219235CIL_0003ZH_0002ENSMUSG00000031778ENSMUST00000034230ENSMUST00000135970ENSMUST00000150307ENSMUST00000151783ENSMUSG00000031779ENSMUST00000034231ENSMUST00000156137
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZH_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912ENSG00000102962ENST00000219235CIL_0003ZH_0002ENSMUSG00000031778ENSMUST00000034230ENSMUSG00000031779ENSMUST00000034231ENSMUST00000156137
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006210 ENST00000006053 28.439±0.00 13.808±0.00 2.712±0.00 17.926±8.15 20.204±17.71 4.009±3.79 5.042±4.04 8.567±7.58 2.632±0.77 133.925±130.31 7.964±6.41 5.039±2.89 5.559±5.21 12.686±11.63
ENST00000563383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.872±0.00 N/A 0.379±0.00
ENST00000564948 N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565912 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.491±0.00 N/A 0.587±0.00 N/A N/A 0.097±0.00
ENSG00000102962 ENST00000219235 0.392±0.00 1.536±0.00 N/A 0.170±0.15 4.608±4.46 0.064±0.04 0.168±0.02 0.358±0.00 0.081±0.02 1.071±0.05 0.046±0.00 0.352±0.29 0.075±0.04 0.111±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031778 ENSMUST00000034230 4.305±1.14 33.599±2.51 10.458±0.67 32.420±34.86 12.753±3.88 37.370±4.26 3.191±0.77 44.502±3.90 0.293±0.14 25.412±6.20 0.541±0.10 11.118±3.48 2.636±2.20 1.390±0.66
ENSMUST00000135970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031779 ENSMUST00000034231 1.728±0.40 0.309±0.08 0.811±0.13 0.045±0.05 23.771±6.84 1.271±0.20 0.078±0.03 0.955±0.54 0.117±0.06 6.544±1.14 0.371±0.50 1.105±0.51 0.047±0.03 1.724±0.78
ENSMUST00000156137 N/A 0.439±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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