C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102962-ENSG00000006210 CGP 9606 16:57358772-57385048
GeneTranscriptPositionBiotype
ENSG00000006210 (CX3CL1)
chemokine (C-X3-C motif) ligand 1 		ENST00000006053 (CX3CL1-001) 57372458-57385048 protein_coding
ENST00000563383 (CX3CL1-002) 57372477-57385041 protein_coding
ENST00000564948 (CX3CL1-004) 57372525-57382478 protein_coding
ENST00000565912 (CX3CL1-003) 57376972-57385042 protein_coding
ENSG00000102962 (CCL22)
chemokine (C-C motif) ligand 22 		ENST00000219235 (CCL22-001) 57358772-57366190 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0003ZH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031779-ENSMUSG00000031778 CGP 10090 8:94745590-94782423
GeneTranscriptPositionBiotype
ENSMUSG00000031778 (Cx3cl1)
chemokine (C-X3-C motif) ligand 1 		ENSMUST00000034230 (Cx3cl1-001) 94772009-94782423 protein_coding
ENSMUST00000135970 (Cx3cl1-004) 94772204-94779638 nonsense_mediated_decay
ENSMUST00000150307 (Cx3cl1-003) 94772225-94780022 nonsense_mediated_decay
ENSMUST00000151783 (Cx3cl1-002) 94772009-94778945 processed_transcript
ENSMUSG00000031779 (Ccl22)
chemokine (C-C motif) ligand 22 		ENSMUST00000034231 (Ccl22-001) 94745590-94751699 protein_coding
ENSMUST00000156137 (Ccl22-002) 94745680-94749873 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZH_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912ENSG00000102962ENST00000219235CIL_0003ZH_0002ENSMUSG00000031778ENSMUST00000034230ENSMUST00000135970ENSMUST00000150307ENSMUST00000151783ENSMUSG00000031779ENSMUST00000034231ENSMUST00000156137
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZH_0001ENSG00000006210ENST00000006053ENST00000563383ENST00000564948ENST00000565912ENSG00000102962ENST00000219235CIL_0003ZH_0002ENSMUSG00000031778ENSMUST00000034230ENSMUSG00000031779ENSMUST00000034231ENSMUST00000156137
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006210 ENST00000006053 28.439±0.00 13.808±0.00 2.712±0.00 17.926±8.15 20.204±17.71 4.009±3.79 5.042±4.04 8.567±7.58 2.632±0.77 133.925±130.31 7.964±6.41 5.039±2.89 5.559±5.21 12.686±11.63
ENST00000563383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.872±0.00 N/A 0.379±0.00
ENST00000564948 N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565912 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 0.491±0.00 N/A 0.587±0.00 N/A N/A 0.097±0.00
ENSG00000102962 ENST00000219235 0.392±0.00 1.536±0.00 N/A 0.170±0.15 4.608±4.46 0.064±0.04 0.168±0.02 0.358±0.00 0.081±0.02 1.071±0.05 0.046±0.00 0.352±0.29 0.075±0.04 0.111±0.09
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031778 ENSMUST00000034230 4.305±1.14 33.599±2.51 10.458±0.67 32.420±34.86 12.753±3.88 37.370±4.26 3.191±0.77 44.502±3.90 0.293±0.14 25.412±6.20 0.541±0.10 11.118±3.48 2.636±2.20 1.390±0.66
ENSMUST00000135970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031779 ENSMUST00000034231 1.728±0.40 0.309±0.08 0.811±0.13 0.045±0.05 23.771±6.84 1.271±0.20 0.078±0.03 0.955±0.54 0.117±0.06 6.544±1.14 0.371±0.50 1.105±0.51 0.047±0.03 1.724±0.78
ENSMUST00000156137 N/A 0.439±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading