C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000176532-ENSG00000122574 CGP 9606 7:29563811-29917066
GeneTranscriptPositionBiotype
ENSG00000122574 (WIPF3)
WAS/WASL interacting protein family, member 3 		ENST00000242140 (WIPF3-201) 29806554-29917066 protein_coding
ENST00000409123 (WIPF3-001) 29806486-29906175 protein_coding
ENST00000409290 (WIPF3-002) 29834725-29917066 protein_coding
ENSG00000176532 (PRR15)
proline rich 15 		ENST00000319694 (PRR15-001) 29563811-29567295 protein_coding
ENST00000450427 (PRR15-002) 29565450-29566383 protein_coding
ENSG00000223437 (TMSB4XP3)
thymosin beta 4, X-linked pseudogene 3 		ENST00000445144 (TMSB4XP3-001) 29625870-29625983 processed_pseudogene
ENSG00000225264 (ZNRF2P2)
zinc and ring finger 2 pseudogene 2 		ENST00000426767 (ZNRF2P2-003) 29651043-29685138 processed_transcript
ENST00000442865 (ZNRF2P2-002) 29598795-29685255 processed_transcript
ENST00000454624 (ZNRF2P2-001) 29684773-29685192 transcribed_processed_pseudogene
ENSG00000227855 (DPY19L2P3)
DPY19L2 pseudogene 3 		ENST00000414296 (DPY19L2P3-001) 29650227-29742594 transcribed_unprocessed_pseudogene
ENST00000602965 (DPY19L2P3-002) 29684642-29687892 processed_transcript
ENST00000602980 (DPY19L2P3-003) 29685154-29688243 processed_transcript
ENSG00000238906 (snoU13)
Small nucleolar RNA U13 		ENST00000459368 (snoU13.1-223) 29912528-29912632 snoRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_0003ZP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045725-ENSMUSG00000086040 CGP 10090 6:54327012-54503768
GeneTranscriptPositionBiotype
ENSMUSG00000045725 (Prr15)
proline rich 15 		ENSMUST00000059138 (Prr15-201) 54327012-54330200 protein_coding
ENSMUSG00000086040 (Wipf3)
WAS/WASL interacting protein family, member 3 		ENSMUST00000126637 (Wipf3-002) 54429603-54503765 protein_coding
ENSMUST00000128480 (Wipf3-004) 54472002-54485360 processed_transcript
ENSMUST00000131043 (Wipf3-003) 54487906-54491542 retained_intron
ENSMUST00000132855 (Wipf3-001) 54429603-54503765 protein_coding
ENSMUST00000163746 (Wipf3-201) 54452883-54503768 protein_coding
ENSMUST00000172046 (Wipf3-202) 54452883-54503768 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZP_0001ENSG00000122574ENST00000242140ENST00000409123ENST00000409290ENSG00000176532ENST00000319694ENST00000450427ENSG00000223437ENST00000445144ENSG00000225264ENST00000426767ENST00000442865ENST00000454624ENSG00000227855ENST00000414296ENST00000602965ENST00000602980ENSG00000238906ENST00000459368CIL_0003ZP_0002ENSMUSG00000045725ENSMUST00000059138ENSMUSG00000086040ENSMUST00000126637ENSMUST00000128480ENSMUST00000131043ENSMUST00000132855ENSMUST00000163746ENSMUST00000172046
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZP_0001ENSG00000122574ENST00000242140ENST00000409123ENST00000409290ENSG00000176532ENST00000319694ENST00000450427ENSG00000223437ENST00000445144ENSG00000225264ENST00000426767ENSG00000227855ENST00000414296ENST00000602965ENST00000602980ENSG00000238906ENST00000459368CIL_0003ZP_0002ENSMUSG00000045725ENSMUST00000059138ENSMUSG00000086040ENSMUST00000126637ENSMUST00000132855ENSMUST00000163746ENSMUST00000172046
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122574 ENST00000242140 0.200±0.00 0.203±0.00 0.311±0.00 2.159±0.00 0.527±0.00 0.473±0.00 1.890±0.00 0.756±0.00 N/A 0.241±0.00 6.668±0.00 11.126±8.54 N/A 3.898±0.00
ENST00000409123 N/A N/A N/A N/A 0.172±0.00 N/A 0.082±0.00 N/A 0.395±0.00 N/A N/A 0.020±0.00 N/A 2.023±0.00
ENST00000409290 0.860±0.00 1.601±0.00 N/A 9.425±7.39 0.677±0.55 0.504±0.15 0.412±0.24 3.206±0.00 0.388±0.23 0.419±0.32 5.224±2.29 8.273±7.94 0.316±0.08 18.700±4.57
ENSG00000176532 ENST00000319694 0.694±0.00 0.096±0.00 0.568±0.00 0.160±0.11 0.389±0.16 6.554±1.77 0.054±0.00 9.123±0.00 0.261±0.24 2.486±0.00 N/A 7.288±2.39 15.938±3.27 1.659±1.49
ENST00000450427 N/A 0.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.729±0.00 N/A N/A
ENSG00000223437 ENST00000445144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.433±0.00 N/A
ENSG00000225264 ENST00000426767 1.959±0.00 0.648±0.00 N/A 1.733±0.00 1.361±0.00 N/A 0.720±0.27 0.360±0.00 0.134±0.00 0.402±0.00 1.111±0.00 0.744±0.00 0.453±0.07 N/A
ENST00000442865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227855 ENST00000414296 N/A N/A N/A N/A 0.046±0.00 N/A 0.243±0.00 0.157±0.00 0.107±0.09 N/A 0.262±0.00 0.026±0.00 0.030±0.00 1.084±0.35
ENST00000602965 N/A 0.134±0.00 N/A 0.719±0.13 0.163±0.00 0.145±0.00 0.168±0.00 0.152±0.00 N/A 0.188±0.03 N/A 0.261±0.19 0.193±0.02 0.927±0.14
ENST00000602980 N/A N/A 0.045±0.00 0.267±0.00 0.054±0.00 0.098±0.00 0.246±0.06 0.153±0.00 0.013±0.00 0.074±0.00 N/A 0.330±0.00 0.182±0.07 0.824±0.26
ENSG00000238906 ENST00000459368 N/A N/A N/A 0.738±0.00 N/A N/A 0.168±0.00 0.725±0.00 N/A N/A N/A N/A N/A 2.510±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045725 ENSMUST00000059138 N/A 2.682±1.00 N/A N/A N/A 13.301±1.89 N/A 6.257±0.61 0.710±0.00 3.340±0.00 N/A 9.628±2.33 1.552±0.26 N/A
ENSMUSG00000086040 ENSMUST00000126637 N/A 0.268±0.00 N/A N/A N/A N/A 0.664±0.01 N/A N/A 0.829±0.02 1.695±0.42 0.688±0.10 N/A N/A
ENSMUST00000128480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132855 N/A N/A N/A 1.554±0.00 0.245±0.00 N/A 1.458±0.16 N/A 0.290±0.00 1.130±0.17 2.389±1.18 0.774±0.12 2.751±2.14 N/A
ENSMUST00000163746 N/A N/A N/A 9.311±0.00 1.051±0.00 N/A 0.757±0.09 N/A N/A N/A 1.668±0.03 N/A N/A N/A
ENSMUST00000172046 0.369±0.00 N/A N/A 7.493±5.95 0.469±0.20 N/A 1.719±0.22 N/A 0.286±0.12 0.736±0.00 2.145±0.53 1.981±0.00 4.315±3.80 N/A

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