C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00042M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000027611-ENSDARG00000051824 CGP 7955 9:25256413-25446353
GeneTranscriptPositionBiotype
ENSDARG00000027611 (sdpra)
serum deprivation response a
ENSDART00000039399 (sdpra-001) 25256413-25275937 protein_coding
ENSDARG00000051824 (tmeff2a)
transmembrane protein with EGF-like and two follistatin-like domains 2a
ENSDART00000073512 (tmeff2a-201) 25282534-25445889 protein_coding
ENSDART00000135897 (tmeff2a-001) 25282529-25446353 protein_coding
ENSDARG00000094437 (si:dkey-273g3.1)
si:dkey-273g3.1
ENSDART00000131903 (si:dkey-273g3.1-001) 25417479-25420876 processed_transcript
ENSDARG00000094591 (si:dkey-273g3.2)
si:dkey-273g3.2
ENSDART00000141805 (si:dkey-273g3.2-001) 25424232-25427727 processed_transcript
CIL_00042M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168497-ENSG00000144339 CGP 9606 2:191834302-192195709
GeneTranscriptPositionBiotype
ENSG00000144339 (TMEFF2)
transmembrane protein with EGF-like and two follistatin-like domains 2
ENST00000272771 (TMEFF2-001) 191950017-192195709 protein_coding
ENST00000392314 (TMEFF2-002) 191949043-192194916 protein_coding
ENST00000409056 (TMEFF2-003) 192176743-192194524 protein_coding
ENST00000487771 (TMEFF2-004) 191992664-191999205 processed_transcript
ENSG00000168497 (SDPR)
serum deprivation response
ENST00000304141 (SDPR-001) 191834302-191847255 protein_coding
ENSG00000213946 (DNAJB1P1)
DnaJ (Hsp40) homolog, subfamily B, member 1 pseudogene 1
ENST00000429417 (DNAJB1P1-001) 191881182-191882205 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042M_0001ENSDARG00000027611ENSDART00000039399ENSDARG00000051824ENSDART00000073512ENSDART00000135897ENSDARG00000094437ENSDART00000131903ENSDARG00000094591ENSDART00000141805CIL_00042M_0002ENSG00000144339ENST00000272771ENST00000392314ENST00000409056ENST00000487771ENSG00000168497ENST00000304141ENSG00000213946ENST00000429417
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00042M_0001ENSDARG00000027611ENSDART00000039399ENSDARG00000051824ENSDART00000073512ENSDART00000135897ENSDARG00000094437ENSDART00000131903ENSDARG00000094591ENSDART00000141805CIL_00042M_0002ENSG00000144339ENST00000272771ENST00000392314ENST00000409056ENST00000487771ENSG00000168497ENST00000304141ENSG00000213946ENST00000429417
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000027611 ENSDART00000039399 N/A N/A N/A 1.678±0.42 N/A N/A 4.650±2.92 1.540±1.61 1.114±0.00 N/A 1.655±0.00 N/A N/A N/A
ENSDARG00000051824 ENSDART00000073512 N/A N/A N/A 11.816±10.94 N/A N/A 0.160±0.00 0.379±0.00 N/A N/A 0.449±0.00 N/A N/A N/A
ENSDART00000135897 N/A N/A N/A 27.554±0.65 N/A N/A 0.200±0.00 0.216±0.00 N/A N/A 0.702±0.00 N/A N/A N/A
ENSDARG00000094437 ENSDART00000131903 N/A N/A N/A 0.333±0.00 N/A N/A N/A 0.847±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000094591 ENSDART00000141805 N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144339 ENST00000272771 0.013±0.00 0.101±0.00 N/A 9.504±0.06 0.074±0.00 0.939±0.00 0.227±0.00 N/A 0.228±0.00 0.146±0.00 N/A 0.058±0.04 0.029±0.01 1.393±0.56
ENST00000392314 N/A N/A 0.102±0.00 1.900±0.21 N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A 0.193±0.00
ENST00000409056 N/A N/A N/A 1.800±0.00 N/A N/A 0.038±0.00 N/A N/A N/A N/A 0.066±0.00 0.008±0.00 N/A
ENST00000487771 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A
ENSG00000168497 ENST00000304141 54.232±0.00 38.601±0.00 2.345±0.00 2.135±0.39 26.733±17.34 25.706±18.75 16.473±4.20 15.241±10.74 17.095±8.11 37.413±1.85 3.680±1.27 7.483±4.37 11.317±4.12 7.611±4.67
ENSG00000213946 ENST00000429417 N/A 0.021±0.00 N/A N/A 0.187±0.16 0.063±0.00 0.055±0.04 0.023±0.00 N/A N/A N/A N/A 0.067±0.00 0.567±0.18

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