C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serum deprivation response
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304141 SDPR-001 ENSG00000168497 9606 - 2:191834302-191847255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304141 54.232±0.00 38.601±0.00 2.345±0.00 2.135±0.39 26.733±17.34 25.706±18.75 16.473±4.20 15.241±10.74 17.095±8.11 37.413±1.85 3.680±1.27 7.483±4.37 11.317±4.12 7.611±4.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042N CIL_00042N_0002 CGP 2:191678068-191847255
CIL_00042M CIL_00042M_0002 CGP 2:191834302-192195709

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001786 IDA phosphatidylserine binding
GO:0005515 IPI protein binding
GO:0005543 TAS phospholipid binding
GO:0005737 IDA cytoplasm
GO:0005829 IDA cytosol
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051572 Sdpr-001 protein_coding Mus_musculus 0 1131
ENSDART00000143956 sdprb-001 protein_coding Danio_rerio 0 209

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