C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00043D_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000074181-ENSG00000105131 CGP 9606 19:15159038-15233435
GeneTranscriptPositionBiotype
ENSG00000074181 (NOTCH3)
notch 3
ENST00000263388 (NOTCH3-001) 15159038-15200981 protein_coding
ENST00000595045 (NOTCH3-003) 15178938-15179659 retained_intron
ENST00000595514 (NOTCH3-005) 15161625-15170150 nonsense_mediated_decay
ENST00000597756 (NOTCH3-006) 15162333-15165967 protein_coding
ENST00000600841 (NOTCH3-004) 15178390-15179220 retained_intron
ENST00000601011 (NOTCH3-002) 15177911-15200902 protein_coding
ENSG00000105131 (EPHX3)
epoxide hydrolase 3
ENST00000221730 (EPHX3-002) 15226919-15232432 protein_coding
ENST00000435261 (EPHX3-201) 15226922-15233047 protein_coding
ENST00000594042 (EPHX3-003) 15231349-15233047 protein_coding
ENST00000602233 (EPHX3-001) 15226925-15233435 protein_coding
ENSG00000269635 (AC004257.1)
ENST00000593588 (AC004257.1-001) 15221015-15222297 lincRNA
ENSG00000275711 (MIR6795)
microRNA 6795
ENST00000620824 (MIR6795-201) 15179283-15179350 miRNA
CIL_00043D_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038146-ENSMUSG00000037577 CGP 10090 17:32120820-32189549
GeneTranscriptPositionBiotype
ENSMUSG00000037577 (Ephx3)
epoxide hydrolase 3
ENSMUST00000087721 (Ephx3-001) 32183770-32189463 protein_coding
ENSMUST00000162117 (Ephx3-002) 32184661-32189549 protein_coding
ENSMUSG00000038146 (Notch3)
notch 3
ENSMUST00000087723 (Notch3-001) 32120820-32166880 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043D_0001ENSG00000074181ENST00000263388ENST00000595045ENST00000595514ENST00000597756ENST00000600841ENST00000601011ENSG00000105131ENST00000221730ENST00000435261ENST00000594042ENST00000602233ENSG00000269635ENST00000593588ENSG00000275711ENST00000620824CIL_00043D_0002ENSMUSG00000037577ENSMUST00000087721ENSMUST00000162117ENSMUSG00000038146ENSMUST00000087723
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00043D_0001ENSG00000074181ENST00000263388ENST00000595514ENST00000597756ENST00000601011ENSG00000105131ENST00000221730ENST00000435261ENST00000594042ENST00000602233ENSG00000269635ENST00000593588ENSG00000275711ENST00000620824CIL_00043D_0002ENSMUSG00000037577ENSMUST00000087721ENSMUST00000162117ENSMUSG00000038146ENSMUST00000087723
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074181 ENST00000263388 97.905±0.00 29.131±0.00 2.040±0.00 2.636±0.00 24.931±22.60 7.783±7.53 2.337±0.00 1.845±1.66 0.679±0.53 N/A 3.167±0.80 6.514±5.22 23.895±10.57 11.686±10.98
ENST00000595045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.864±0.00 N/A N/A
ENST00000597756 N/A N/A N/A N/A N/A 1.500±0.00 N/A N/A N/A N/A N/A N/A N/A 2.807±0.00
ENST00000600841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601011 N/A N/A 0.541±0.00 N/A N/A 0.412±0.00 1.070±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000105131 ENST00000221730 0.227±0.00 N/A N/A 0.164±0.00 N/A 0.089±0.00 0.040±0.00 0.903±0.00 0.026±0.00 1.748±0.00 N/A 8.732±8.30 0.277±0.10 0.746±0.12
ENST00000435261 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A 3.210±0.00 0.200±0.00 0.668±0.00
ENST00000594042 N/A N/A N/A 0.230±0.00 N/A 0.221±0.02 N/A N/A 0.069±0.00 N/A N/A 2.499±0.00 0.647±0.00 N/A
ENST00000602233 N/A 0.908±0.00 N/A N/A 0.415±0.00 0.029±0.00 N/A N/A N/A N/A N/A 0.935±0.00 N/A N/A
ENSG00000269635 ENST00000593588 3.615±0.00 9.650±0.00 N/A 3.794±0.00 4.138±0.00 4.861±0.00 3.149±0.00 4.573±0.00 1.618±0.00 3.524±0.00 2.431±0.00 1.479±1.15 0.170±0.00 2.229±1.97
ENSG00000275711 ENST00000620824 N/A 1.159±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037577 ENSMUST00000087721 0.427±0.43 N/A 0.334±0.06 0.062±0.00 0.375±0.24 0.151±0.07 0.293±0.08 0.137±0.07 0.061±0.03 1.692±0.17 0.133±0.03 0.261±0.16 0.087±0.03 0.045±0.01
ENSMUST00000162117 1.666±0.90 0.517±0.15 1.338±0.01 0.109±0.05 1.096±0.28 0.339±0.17 0.603±0.29 0.399±0.12 0.083±0.04 3.784±2.32 0.196±0.10 0.369±0.19 0.066±0.03 0.063±0.02
ENSMUSG00000038146 ENSMUST00000087723 20.447±5.43 3.439±3.57 8.873±1.38 7.107±3.74 27.242±6.49 4.626±0.75 9.138±0.55 5.467±1.15 0.533±0.11 39.154±0.88 2.923±0.67 15.353±5.12 1.726±1.41 0.404±0.13

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