C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00046A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000054963-ENSDARG00000054950 CGP 7955 3:29011402-29023875
GeneTranscriptPositionBiotype
ENSDARG00000054950 (fam86a)
family with sequence similarity 86, member A 		ENSDART00000138648 (fam86a-002) 29020729-29022267 retained_intron
ENSDART00000138840 (fam86a-001) 29020729-29023875 protein_coding
ENSDARG00000054963 (alg1)
asparagine-linked glycosylation 1 homolog (yeast, beta-1,4-mannosyltransferase) 		ENSDART00000077235 (alg1-001) 29011402-29020759 protein_coding
ENSDART00000144495 (alg1-002) 29012295-29017201 processed_transcript

Danio rerio Ensembl (Zv9)

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CIL_00046A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039427-ENSMUSG00000022544 CGP 10090 16:5233621-5255983
GeneTranscriptPositionBiotype
ENSMUSG00000022544 (Fam86)
family with sequence similarity 86 		ENSMUST00000064635 (Fam86-001) 5244152-5255983 protein_coding
ENSMUST00000129729 (Fam86-004) 5247387-5248870 retained_intron
ENSMUST00000132225 (Fam86-002) 5244879-5255941 retained_intron
ENSMUST00000139584 (Fam86-003) 5247375-5255956 protein_coding
ENSMUST00000140718 (Fam86-005) 5249075-5255929 retained_intron
ENSMUSG00000087168 (Gm15983)
predicted gene 15983 		ENSMUST00000140000 (Gm15983-001) 5254786-5289621 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046A_0001ENSDARG00000054950ENSDART00000138648ENSDART00000138840ENSDARG00000054963ENSDART00000077235ENSDART00000144495CIL_00046A_0002ENSMUSG00000022544ENSMUST00000064635ENSMUST00000129729ENSMUST00000132225ENSMUST00000139584ENSMUST00000140718ENSMUSG00000087168ENSMUST00000140000
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00046A_0001ENSDARG00000054950ENSDART00000138648ENSDART00000138840ENSDARG00000054963ENSDART00000077235ENSDART00000144495CIL_00046A_0002ENSMUSG00000022544ENSMUST00000064635ENSMUST00000139584ENSMUSG00000087168ENSMUST00000140000
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000054950 ENSDART00000138648 N/A N/A N/A 0.631±0.00 N/A N/A 0.690±0.59 N/A N/A N/A 0.298±0.00 N/A N/A N/A
ENSDART00000138840 N/A N/A N/A 2.470±0.77 N/A N/A 2.405±1.38 7.951±5.63 0.679±0.00 N/A 0.781±0.00 N/A N/A N/A
ENSDARG00000054963 ENSDART00000077235 N/A N/A N/A 6.198±4.26 N/A N/A 1.780±0.17 20.718±0.00 1.465±0.00 N/A 0.930±0.00 N/A N/A N/A
ENSDART00000144495 N/A N/A N/A 4.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022544 ENSMUST00000064635 15.217±2.14 24.914±4.22 15.098±0.64 4.583±1.25 17.486±2.78 14.563±1.22 6.953±1.21 19.560±1.74 6.693±1.97 15.415±0.82 3.585±0.23 13.782±5.68 10.046±1.97 6.527±0.27
ENSMUST00000129729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139584 10.962±0.84 23.479±0.00 N/A N/A N/A 11.989±0.90 N/A N/A 11.497±0.00 N/A N/A 22.398±4.20 N/A 13.002±1.44
ENSMUST00000140718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087168 ENSMUST00000140000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.432±0.02 N/A 1.151±0.00 0.326±0.00

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